Non-Coding RNA Search

Utr1-UTR010063A09

Sequence:


               
               AAAGTCTAGGCTGGAGATTTCAGCCTGCAAACTCCCAGACTCCAGGAAGGAACCTTCTCT
GCTTTCTCTCTAGTCTCTTTGGAGCACCTTGAGGACAGGAGCTTGGCTTCAAGAAGACAG
GTAGGTGACGGCGAAGGAGGGAAATGAGGTAGACAGAGAGAGAAAACGACATACTCAGAG
ACCAAACCAGAAACAGAGCTCGATGGAAACAGGCATAGAGACCGTCAGAAACCCAGGAAA
CACAGGCAGATTAAGGCATGATCAGAAATAGAATCTGGCATTCTCAGGACTCCAATAAGC
AGCTCCGAATCTGGCGGAAAGGGAGTGCGCTATTGAAAGACAGATTAACAGCTTGGTAAA
TTAAACAATTTGGTAATTCATACTAAAAATAAAAATAAATCTAGACAGGGAAAAAGGGAC
TTTCAGAGAATTATTGCAATACGGGGATGGAGACCAGTGCAATAAATAAAACAAACATAG
AGCTGCAAGCATCTCAAAGGCCAGGCAGAAGGAATTTTCTCCCACTATGGGAAAGGGGCA
TCAAAGAACATACCTCTAGGTAGTGAGATGATCAGGGGCTGTTGTACTCTTAGGAAGAAT
CACGAAGGGGAGGTTGCATGCTGGGTCAGGAGATGGGGGTCAAATTAAGGGGACTAGAGA
AAGGAGAGAAGCTTTACATATGTTTAGTTTCAAGCACCTTTTAATTGATCGGGGGGCAAA
CAGCTCAGCTAATCCTTTCTGAGTCCAAGAATGGGACTTCAAAGGTCTGCGTCTGGCCTC
AAGATAAGAAATAAAGGGACACGTGCGTGAGTCTCATCTAAGTCTTACGGGGAACAGCGG
GTCTTTGCGATAAGCTAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGTCTAGGCTGGAGATTTCAGCCTGCAAACTCCCAGACTCCAGGAAGGAACCTTCTCT
GCTTTCTCTCTAGTCTCTTTGGAGCACCTTGAGGACAGGAGCTTGGCTTCAAGAAGACAG
GTAGGTGACGGCGAAGGAGGGAAATGAGGTAGACAGAGAGAGAAAACGACATACTCAGAG
ACCAAACCAGAAACAGAGCTCGATGGAAACAGGCATAGAGACCGTCAGAAACCCAGGAAA
CACAGGCAGATTAAGGCATGATCAGAAATAGAATCTGGCATTCTCAGGACTCCAATAAGC
AGCTCCGAATCTGGCGGAAAGGGAGTGCGCTATTGAAAGACAGATTAACAGCTTGGTAAA
TTAAACAATTTGGTAATTCATACTAAAAATAAAAATAAATCTAGACAGGGAAAAAGGGAC
TTTCAGAGAATTATTGCAATACGGGGATGGAGACCAGTGCAATAAATAAAACAAACATAG
AGCTGCAAGCATCTCAAAGGCCAGGCAGAAGGAATTTTCTCCCACTATGGGAAAGGGGCA
TCAAAGAACATACCTCTAGGTAGTGAGATGATCAGGGGCTGTTGTACTCTTAGGAAGAAT
CACGAAGGGGAGGTTGCATGCTGGGTCAGGAGATGGGGGTCAAATTAAGGGGACTAGAGA
AAGGAGAGAAGCTTTACATATGTTTAGTTTCAAGCACCTTTTAATTGATCGGGGGGCAAA
CAGCTCAGCTAATCCTTTCTGAGTCCAAGAATGGGACTTCAAAGGTCTGCGTCTGGCCTC
AAGATAAGAAATAAAGGGACACGTGCGTGAGTCTCATCTAAGTCTTACGGGGAACAGCGG
GTCTTTGCGATAAGCTAATT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               44-163, + strand, RNAz p=0.662878

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               44-163, + strand, RNAz p=0.662878

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-775, gnl|bosTau2|chr15 (29035949-29035186)
               

               
               4-775, gnl|Hg17|chr11 (6724263-6723433)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-775, gnl|bosTau2|chr15 (29035949-29035186)
               

               
               4-775, gnl|Hg17|chr11 (6724263-6723433)

	4-775, gnl\|bosTau2\|chr15 (29035949-29035186)
	4-775, gnl\|Hg17\|chr11 (6724263-6723433)