Non-Coding RNA Search

Utr1-UTR010064A04

Sequence:


               
               ATTGCCTGAAATAGATAGGCTACCATTTAGGACTTGTGAGGCTTTCTGTCACATAAAAAT
CAAATAATATATACTGTTTTCAGAGGATCTGATCAATGCATCTAGGAGAAGGGGGGGCCC
GGCTGTCCTCTCCTGGCACCAGGTCTACCACCAGGTATGAGTAAGCACAGTTGATTCCCA
TCCAGTGTTAATCACTGGCCCCTTCTTCGTTTGGAGGGTCAGCCATGCATTTACTACAGA
GATAGTCATTTGAGGGATAGTTCTGGGCATGAGGTAAGCAGTAATGAAAAGCACACTTCT
GGTCTTGTCTTGTCTTCATGGAGCCTCCAGTCTTTTGGGAAAACAATGTGGGGAGCAGGG
CCTGATACAGCCGCAGAGCCTTGGGTATCACACGGAACCTCCCTGCCTCCTTTACTGCAG
TTTGTCTCTTGAGGCCTAGTGGGGGGCTCTTTGCAGGCCGGAGTCCTGAGGCTCAGAAAT
GAGGCTGGGCCTGTTTGCCAGTGAGAATGTGGGTTCATAGCAGCTGCTCAGAGGGGTGTG
GTTCCCTGGACTCCAGGCCCTTCACTGGCCGGTTAGTAGAAGTAGTGGCCTTCAAAGATC
CTCTCTTTACCTTCCCACTCCCTCCCTTGCTATTCAGGCGTCTTCAGTCCCAGGTCTAGA
ACCAGCTTTGCCACACTAAGGCCAGTCAAGGAGATGTTTTTGTTTTCCCAGTGCTGACCT
CCATGTGATGCCTGGAGGCGCTTGGAGGCTTGCCTCTGACCACTGGTTTCCCTTACTCTG
ATCTCAGACCTTTTAGCATGAGGTCAAGAGCTCGGTAGCCATGCCTGTGGGGAGGGGTTA
CTACCAGAGGACAGGGCCTGGCCCAGGCTCCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGCCTGAAATAGATAGGCTACCATTTAGGACTTGTGAGGCTTTCTGTCACATAAAAAT
CAAATAATATATACTGTTTTCAGAGGATCTGATCAATGCATCTAGGAGAAGGGGGGGCCC
GGCTGTCCTCTCCTGGCACCAGGTCTACCACCAGGTATGAGTAAGCACAGTTGATTCCCA
TCCAGTGTTAATCACTGGCCCCTTCTTCGTTTGGAGGGTCAGCCATGCATTTACTACAGA
GATAGTCATTTGAGGGATAGTTCTGGGCATGAGGTAAGCAGTAATGAAAAGCACACTTCT
GGTCTTGTCTTGTCTTCATGGAGCCTCCAGTCTTTTGGGAAAACAATGTGGGGAGCAGGG
CCTGATACAGCCGCAGAGCCTTGGGTATCACACGGAACCTCCCTGCCTCCTTTACTGCAG
TTTGTCTCTTGAGGCCTAGTGGGGGGCTCTTTGCAGGCCGGAGTCCTGAGGCTCAGAAAT
GAGGCTGGGCCTGTTTGCCAGTGAGAATGTGGGTTCATAGCAGCTGCTCAGAGGGGTGTG
GTTCCCTGGACTCCAGGCCCTTCACTGGCCGGTTAGTAGAAGTAGTGGCCTTCAAAGATC
CTCTCTTTACCTTCCCACTCCCTCCCTTGCTATTCAGGCGTCTTCAGTCCCAGGTCTAGA
ACCAGCTTTGCCACACTAAGGCCAGTCAAGGAGATGTTTTTGTTTTCCCAGTGCTGACCT
CCATGTGATGCCTGGAGGCGCTTGGAGGCTTGCCTCTGACCACTGGTTTCCCTTACTCTG
ATCTCAGACCTTTTAGCATGAGGTCAAGAGCTCGGTAGCCATGCCTGTGGGGAGGGGTTA
CTACCAGAGGACAGGGCCTGGCCCAGGCTCCCG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               764-872, - strand, RNAz p=0.535869

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               764-872, - strand, RNAz p=0.535869

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-416, gnl|bosTau2|chr26 (14024048-14023602)
               

               
               1-416, gnl|Hg17|chr10 (104272320-104272727)
               

               
               1-416, gnl|Mm7|chr19 (46308395-46308787)
               


               
               500-872, gnl|bosTau2|chr26 (14023207-14022815)
               

               
               500-872, gnl|Hg17|chr10 (104272839-104273200)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-416, gnl|bosTau2|chr26 (14024048-14023602)
               

               
               1-416, gnl|Hg17|chr10 (104272320-104272727)
               

               
               1-416, gnl|Mm7|chr19 (46308395-46308787)
               


               
               500-872, gnl|bosTau2|chr26 (14023207-14022815)
               

               
               500-872, gnl|Hg17|chr10 (104272839-104273200)

	1-416, gnl\|bosTau2\|chr26 (14024048-14023602)
	1-416, gnl\|Hg17\|chr10 (104272320-104272727)
	1-416, gnl\|Mm7\|chr19 (46308395-46308787)

	500-872, gnl\|bosTau2\|chr26 (14023207-14022815)
	500-872, gnl\|Hg17\|chr10 (104272839-104273200)