Non-Coding RNA Search

Utr1-UTR010066A08

Sequence:


               
               AATGCAAGAGCCCTCTTCAGAGGCGAGCCCTCAGAGGGTGGGACGGAGCGCCTGGGTCTC
TCATGCACGTGGAAAACCCTCAGGGCTTGCTTTCCTAAGTCAGTTGGATCCAAGTGCGAA
ATCGTGGTTGGTAGTTTTTTCACCTCTTTCCAGGATTCCAGTGTTTTCTGTCTGGAAACA
GCCACTGCCACATCCACAAGTTCAAGCTTGAGAAAGTGACCCAGAATCATTGCATGTCAA
GAGGCCACACCACCGTAACTGCGCTGCGAGGGCCAGAGAAAAACCTGCCAATGAACATTC
TTGGTGGATGAGAAAAACGCATCAGCCCTTGTAAAACGAGGTGTTGGCACCATATTTAGC
CAGGGATCCAGCCTTCTCTCCAGCATTTTCGGTGCCAAATAGTCGATCCTAATAATCGTT
TCAGAAACAGTCACTATCACCTTCTCCAATTACTCCAGTCTCCGTATTTCAAACTGAAGA
ATACTGGCCTTAATTGTAGAATTTCTCTCCGCTGCTCCCAAACGGCCATTTGGAAATTCA
CCAAATACTTTTCAGGCCTATCTGGGAAGACAAGCATGATCAGCAACATCTCCTCCTGTG
ATTTGGTTTGCAAGGCATCTTAAGAAACAAAGGGGCTGGGGAGTATTCAGAGACCTTATA
TATAGCACATCGGAATCCCTAGAAGATCAGGGGCTCTCCTTGTGGCTCAGCGTGTTAAGA
ACCTGACCAAGAggagttcccactgtggctcatcggtaatgaacacaactagtatccatg
aggatgcaggttcgattcctggcctcgctcagtgggttgaaggatctggagttgctgtga
gctgtggtgtaggctacagctcagattctacccctagcctgggagcttccCATATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATGCAAGAGCCCTCTTCAGAGGCGAGCCCTCAGAGGGTGGGACGGAGCGCCTGGGTCTC
TCATGCACGTGGAAAACCCTCAGGGCTTGCTTTCCTAAGTCAGTTGGATCCAAGTGCGAA
ATCGTGGTTGGTAGTTTTTTCACCTCTTTCCAGGATTCCAGTGTTTTCTGTCTGGAAACA
GCCACTGCCACATCCACAAGTTCAAGCTTGAGAAAGTGACCCAGAATCATTGCATGTCAA
GAGGCCACACCACCGTAACTGCGCTGCGAGGGCCAGAGAAAAACCTGCCAATGAACATTC
TTGGTGGATGAGAAAAACGCATCAGCCCTTGTAAAACGAGGTGTTGGCACCATATTTAGC
CAGGGATCCAGCCTTCTCTCCAGCATTTTCGGTGCCAAATAGTCGATCCTAATAATCGTT
TCAGAAACAGTCACTATCACCTTCTCCAATTACTCCAGTCTCCGTATTTCAAACTGAAGA
ATACTGGCCTTAATTGTAGAATTTCTCTCCGCTGCTCCCAAACGGCCATTTGGAAATTCA
CCAAATACTTTTCAGGCCTATCTGGGAAGACAAGCATGATCAGCAACATCTCCTCCTGTG
ATTTGGTTTGCAAGGCATCTTAAGAAACAAAGGGGCTGGGGAGTATTCAGAGACCTTATA
TATAGCACATCGGAATCCCTAGAAGATCAGGGGCTCTCCTTGTGGCTCAGCGTGTTAAGA
ACCTGACCAAGAggagttcccactgtggctcatcggtaatgaacacaactagtatccatg
aggatgcaggttcgattcctggcctcgctcagtgggttgaaggatctggagttgctgtga
gctgtggtgtaggctacagctcagattctacccctagcctgggagcttccCATATGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               376-527, - strand, RNAz p=0.976505

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               376-527, - strand, RNAz p=0.976505

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               50-678, gnl|bosTau2|chr6 (29333056-29333688)
               

               
               50-678, gnl|Hg17|chr4 (37995427-37994787)
               

               
               50-678, gnl|Mm7|chr5 (63729278-63728631)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               50-678, gnl|bosTau2|chr6 (29333056-29333688)
               

               
               50-678, gnl|Hg17|chr4 (37995427-37994787)
               

               
               50-678, gnl|Mm7|chr5 (63729278-63728631)

	50-678, gnl\|bosTau2\|chr6 (29333056-29333688)
	50-678, gnl\|Hg17\|chr4 (37995427-37994787)
	50-678, gnl\|Mm7\|chr5 (63729278-63728631)