Non-Coding RNA Search

Utr1-UTR010069E09

Sequence:


               
               GGTGGGATCTAAGGTATTACCTTTGACACAGTCCTGTTGGGGCTTTCTTTTTCTTTTTAG
TCTTTTTagggctgcacccaaggcatacagaagttcccaggctaggggtagaatcagagc
tgcagctgctggcctactccacacccacagcaatgccagatccaagccttgtctgcaacc
tacactgcaactcatggcaacaccagatccttaacccactgagcgaggtcaggaatcgaa
cctgtgtcctcatgaattctggtcagattcattaccatgagccacaacaggaactccCTG
TTGGGGCTTTCTGGAGAAATCATCTTAGACACTCCAGGGCCTAGGACATCCACTTCTTTC
CATTCCAACCTGGGTTAGGTCACTTTCTCAGAAGTAGCATCCCAAACAATTGAGATTATC
AAGGTCAATAAAGGACAGCCCATTCTTTGCTTTATGCTTTCCTCTTTTCTGTGTCATCTT
CTGCATGGTTTAAGGGAAAGCATAGTTGTGTTGGATTGCTGCCTTGGCTGAAACTATGTA
ACTTTGGGGAAATTGAGTTCCATCAGTTATCTTAGATTTCCTCACTTATATGTAAAAAAG
AGGTTGTACAGGATGACTTGTAAGAACCTACTGAACTCCAAATTTAGGTTTTATATTCAG
TCTCTCCTTCCCTTTTTCTAGCTTAGTCTCCTTTTTTTCCCCAAAAAAACAAAAACCCAC
TCCTCTCTGTATCTTTTCATTATTAACTAAACATACTTTTCAAAATCTTCTCCTTTCCAC
TGTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGGATCTAAGGTATTACCTTTGACACAGTCCTGTTGGGGCTTTCTTTTTCTTTTTAG
TCTTTTTagggctgcacccaaggcatacagaagttcccaggctaggggtagaatcagagc
tgcagctgctggcctactccacacccacagcaatgccagatccaagccttgtctgcaacc
tacactgcaactcatggcaacaccagatccttaacccactgagcgaggtcaggaatcgaa
cctgtgtcctcatgaattctggtcagattcattaccatgagccacaacaggaactccCTG
TTGGGGCTTTCTGGAGAAATCATCTTAGACACTCCAGGGCCTAGGACATCCACTTCTTTC
CATTCCAACCTGGGTTAGGTCACTTTCTCAGAAGTAGCATCCCAAACAATTGAGATTATC
AAGGTCAATAAAGGACAGCCCATTCTTTGCTTTATGCTTTCCTCTTTTCTGTGTCATCTT
CTGCATGGTTTAAGGGAAAGCATAGTTGTGTTGGATTGCTGCCTTGGCTGAAACTATGTA
ACTTTGGGGAAATTGAGTTCCATCAGTTATCTTAGATTTCCTCACTTATATGTAAAAAAG
AGGTTGTACAGGATGACTTGTAAGAACCTACTGAACTCCAAATTTAGGTTTTATATTCAG
TCTCTCCTTCCCTTTTTCTAGCTTAGTCTCCTTTTTTTCCCCAAAAAAACAAAAACCCAC
TCCTCTCTGTATCTTTTCATTATTAACTAAACATACTTTTCAAAATCTTCTCCTTTCCAC
TGTCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               413-526, + strand, RNAz p=0.682697

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               413-526, + strand, RNAz p=0.682697

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               437-535, + strand, RNAmicro p=0.902268

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               437-535, + strand, RNAmicro p=0.902268

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               298-629, gnl|bosTau2|chr26 (12950327-12950664)
               

               
               298-629, gnl|Hg17|chr10 (102262919-102262577)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               298-629, gnl|bosTau2|chr26 (12950327-12950664)
               

               
               298-629, gnl|Hg17|chr10 (102262919-102262577)

	298-629, gnl\|bosTau2\|chr26 (12950327-12950664)
	298-629, gnl\|Hg17\|chr10 (102262919-102262577)