Non-Coding RNA Search

Utr1-UTR010076G09

Sequence:


               
               TTAGCTGAAACTTTCCTGATGTTGCACTTCCTTGAAGTTCAGTTGCTGCCTTTAAAAGAA
GAATCTTTGTCACTTGCTCTTTTTAAGCGGTTTTTCCTCTCCTTTGAAGGATATCTAGTT
TTCCCTCTCTCCTTAGCCTAAATGAAAATGGCCCCAAGATGCATGCAATTTTGAGAACTT
CAGATTGCAGATTCTACATAATTCAAATAACAGAGCCGTGGAACTCCACTCTTTCATTTG
GAGTCTGTGAACCGCTGAGACTTGTGGAGTGTAAGTGATGTCAGAATTTTGCCCTAAAGT
GTAGTGTCAAGGCCAGAATTCTTCCCTGGGATATAGGACCCATGCGCTCATAACCCAGGG
CTGAGTGCCACCCTCATTGTTTTAATTACAGAGCTATGGAGTGTGGCTCACAAACTTGGA
TTTGACTACAGCAGAAGAAAGAAGATATTGTACGCCTTCAATCAGCTTTGTATTAGGAGA
TCCTTAAAGGGAAAATTATGTGAAAGAAAGAAGGAGGAAGAAAACAAACTAGTAAGAGCC
CTATTTCAATATAATTTGGAGAAAATGACTGATTTGGTTTGGTCGTGTTGCCAGAAGAGA
TGACTCAAGGCTTCCAAACAAGAAATGGAAATCAGGAGGATGCCTGAAGCCTGAAAGAAG
AACAAATTGTGAAGATATGATTGACTGTAAGGCTTCAAAATCAACTGTACCAAAGATGAG
CTTGGATCATTGCCCAGAAACAGAACTGAATGGTGATGTTCATTTAGGTCCTGACTGTTG
AAACAAAATAAAATGTAGTAATTGTGCTCTGTTAGGTACACAGACATCTTAATGGCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAGCTGAAACTTTCCTGATGTTGCACTTCCTTGAAGTTCAGTTGCTGCCTTTAAAAGAA
GAATCTTTGTCACTTGCTCTTTTTAAGCGGTTTTTCCTCTCCTTTGAAGGATATCTAGTT
TTCCCTCTCTCCTTAGCCTAAATGAAAATGGCCCCAAGATGCATGCAATTTTGAGAACTT
CAGATTGCAGATTCTACATAATTCAAATAACAGAGCCGTGGAACTCCACTCTTTCATTTG
GAGTCTGTGAACCGCTGAGACTTGTGGAGTGTAAGTGATGTCAGAATTTTGCCCTAAAGT
GTAGTGTCAAGGCCAGAATTCTTCCCTGGGATATAGGACCCATGCGCTCATAACCCAGGG
CTGAGTGCCACCCTCATTGTTTTAATTACAGAGCTATGGAGTGTGGCTCACAAACTTGGA
TTTGACTACAGCAGAAGAAAGAAGATATTGTACGCCTTCAATCAGCTTTGTATTAGGAGA
TCCTTAAAGGGAAAATTATGTGAAAGAAAGAAGGAGGAAGAAAACAAACTAGTAAGAGCC
CTATTTCAATATAATTTGGAGAAAATGACTGATTTGGTTTGGTCGTGTTGCCAGAAGAGA
TGACTCAAGGCTTCCAAACAAGAAATGGAAATCAGGAGGATGCCTGAAGCCTGAAAGAAG
AACAAATTGTGAAGATATGATTGACTGTAAGGCTTCAAAATCAACTGTACCAAAGATGAG
CTTGGATCATTGCCCAGAAACAGAACTGAATGGTGATGTTCATTTAGGTCCTGACTGTTG
AAACAAAATAAAATGTAGTAATTGTGCTCTGTTAGGTACACAGACATCTTAATGGCTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               542-701, - strand, RNAz p=0.850861

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               542-701, - strand, RNAz p=0.850861

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-839, gnl|bosTau2|chr21 (31696160-31695302)
               

               
               1-839, gnl|Hg17|chr14 (36281672-36280808)
               

               
               1-839, gnl|Mm7|chr12 (54713461-54711572)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-839, gnl|bosTau2|chr21 (31696160-31695302)
               

               
               1-839, gnl|Hg17|chr14 (36281672-36280808)
               

               
               1-839, gnl|Mm7|chr12 (54713461-54711572)

	1-839, gnl\|bosTau2\|chr21 (31696160-31695302)
	1-839, gnl\|Hg17\|chr14 (36281672-36280808)
	1-839, gnl\|Mm7\|chr12 (54713461-54711572)