Utr1-UTR01C060093
|
TTTTCAACCCTGACTTCGTGCTCACACAGCTTCCCTTTCCAGCCCTAGACTGTGGGATTG
GGAGGGAGCTTTCCAGGCCCTTTCCCCCGGGGTGCCCTGTGCCCTTGCTCTAGCTGTTCC
CTGGCCTGGGCCGCCCTTTCCTAGCTGCCATCCATCTCCCACCTGTCAGTTCCTATCTTT
CACTTAGACATTGCCTCCTCCAAGAAGCGTTCCAGGATCCTTCCCAGGCCCAATTAATCT
CCAGCCCTTTATGCATCCATGACAGCCCTTCCTGAGAATGTCTTCCTCACCACACCACCA
GCTCCTTTAGGCCAGTTACTCATCCCTGTGCACTGTCCCCATCTCCCTCCCCAGTGTCTT
ATCACGCCTGGGACGTGTCAGGGATCAAAGAAGAGCCTGTAGTCCAGGGAGGACTGTGAG
GGCAAAGGCTGGGCACTGGGGGACGAGCATGAGCTGATTTCTCTCAACCCCACTGTTAGC
AGATGCGCTGCAAAAGATGGGGCAGGGCAGGGGCATATAAATCAACCACTTCCAACTCTT
GGCTTTTGGAGTCTCCAAGCACAGCCCCTCCCAGTTTACAGAGAGGAACAGGGACAGCCA
CCCAGGTGGGGAAGCACAGACAAGTCCTTTGAGGATCACCAGCCCCGTGTTCTTGCCCCT
TCCTCAGCCTCCATTCAGTTGCATGTCCAACACATGCCCACTTGTGGCACCTGGCTTTAC
ATGGGCACCTCCATTAGGAGGGCGGGAAGTGCAGGCACTGGGGGTGGGGATGGTCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTCAACCCTGACTTCGTGCTCACACAGCTTCCCTTTCCAGCCCTAGACTGTGGGATTG
GGAGGGAGCTTTCCAGGCCCTTTCCCCCGGGGTGCCCTGTGCCCTTGCTCTAGCTGTTCC
CTGGCCTGGGCCGCCCTTTCCTAGCTGCCATCCATCTCCCACCTGTCAGTTCCTATCTTT
CACTTAGACATTGCCTCCTCCAAGAAGCGTTCCAGGATCCTTCCCAGGCCCAATTAATCT
CCAGCCCTTTATGCATCCATGACAGCCCTTCCTGAGAATGTCTTCCTCACCACACCACCA
GCTCCTTTAGGCCAGTTACTCATCCCTGTGCACTGTCCCCATCTCCCTCCCCAGTGTCTT
ATCACGCCTGGGACGTGTCAGGGATCAAAGAAGAGCCTGTAGTCCAGGGAGGACTGTGAG
GGCAAAGGCTGGGCACTGGGGGACGAGCATGAGCTGATTTCTCTCAACCCCACTGTTAGC
AGATGCGCTGCAAAAGATGGGGCAGGGCAGGGGCATATAAATCAACCACTTCCAACTCTT
GGCTTTTGGAGTCTCCAAGCACAGCCCCTCCCAGTTTACAGAGAGGAACAGGGACAGCCA
CCCAGGTGGGGAAGCACAGACAAGTCCTTTGAGGATCACCAGCCCCGTGTTCTTGCCCCT
TCCTCAGCCTCCATTCAGTTGCATGTCCAACACATGCCCACTTGTGGCACCTGGCTTTAC
ATGGGCACCTCCATTAGGAGGGCGGGAAGTGCAGGCACTGGGGGTGGGGATGGTCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3-435, gnl|bosTau2|chr2 (79007671-79008113) |
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3-435, gnl|Hg17|chr1 (27551443-27550958) |
| |
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487-739, gnl|bosTau2|chr2 (79008118-79008383) |
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487-739, gnl|canFam2|chr2 (75648784-75648404) |
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487-739, gnl|dasNov1|scaffold_2630 (8094-7698) |
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487-739, gnl|echTel1|scaffold_254600 (13406-12949) |
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487-739, gnl|hg17|chr1 (27550512-27550959) |
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487-739, gnl|Hg17|chr1 (27550948-27550632) |
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487-739, gnl|oryCun1|scaffold_204038 (1327-926) |
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487-739, gnl|panTro1|chr1 (28230884-28231333) |
|
487-739, gnl|rheMac2|chr1 (30223091-30223523) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-435, gnl|bosTau2|chr2 (79007671-79008113) |
|
3-435, gnl|Hg17|chr1 (27551443-27550958) |
| |
|
487-739, gnl|bosTau2|chr2 (79008118-79008383) |
|
487-739, gnl|canFam2|chr2 (75648784-75648404) |
|
487-739, gnl|dasNov1|scaffold_2630 (8094-7698) |
|
487-739, gnl|echTel1|scaffold_254600 (13406-12949) |
|
487-739, gnl|hg17|chr1 (27550512-27550959) |
|
487-739, gnl|Hg17|chr1 (27550948-27550632) |
|
487-739, gnl|oryCun1|scaffold_204038 (1327-926) |
|
487-739, gnl|panTro1|chr1 (28230884-28231333) |
|
487-739, gnl|rheMac2|chr1 (30223091-30223523) |
