Non-Coding RNA Search

Utr1-UTR01E120096

Sequence:


               
               ACTGGGGATTTTATTTTTTGTCTTTTTAGAgccacacctgcggtatatggaggttcccag
gctaggggtcggatcagagctgttgctgccagcctacaccacagccacagcaacaccaga
tctgagccatgtctgtgacctacatcacagttcacggcactgccagatccttaacccact
gagcgaggccagggatcgaacccacaacctcatggttcccagtcggatccgtttctgctg
tgccatgatgggaactccAGCAATGGATTTTATTAATTGCTTCCACTTACAAATCAACTT
AAAGTCACCAGATGTGTAGACACAATGAGTTTTTTTGTTGTTTATCGTCTTTAACTGAAA
TGATGACAAAGGACATAGAGCTATTTAAAAACAAAACCACAGAGCACCCCGGCTGAGATA
AAGAGGTGGCATCCAGTGTGGGCTTCACGTTCTGCGTGGCCACCTGCTGCGTGACCTTGG
TGATCCAGGGTTTGCCTATGATCCTGACTTTGTGGTTCCCCTCCTCCACAACCCCAATCA
ACCCCAATAATCCACAAATGGAGACCTCACTACATATAGGAGACTTTATCTCTGCACAGA
ACCCAGCTGCTTGCTCATGCAGTAAATAGATTAGAACTAGGCTTCTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGGGGATTTTATTTTTTGTCTTTTTAGAgccacacctgcggtatatggaggttcccag
gctaggggtcggatcagagctgttgctgccagcctacaccacagccacagcaacaccaga
tctgagccatgtctgtgacctacatcacagttcacggcactgccagatccttaacccact
gagcgaggccagggatcgaacccacaacctcatggttcccagtcggatccgtttctgctg
tgccatgatgggaactccAGCAATGGATTTTATTAATTGCTTCCACTTACAAATCAACTT
AAAGTCACCAGATGTGTAGACACAATGAGTTTTTTTGTTGTTTATCGTCTTTAACTGAAA
TGATGACAAAGGACATAGAGCTATTTAAAAACAAAACCACAGAGCACCCCGGCTGAGATA
AAGAGGTGGCATCCAGTGTGGGCTTCACGTTCTGCGTGGCCACCTGCTGCGTGACCTTGG
TGATCCAGGGTTTGCCTATGATCCTGACTTTGTGGTTCCCCTCCTCCACAACCCCAATCA
ACCCCAATAATCCACAAATGGAGACCTCACTACATATAGGAGACTTTATCTCTGCACAGA
ACCCAGCTGCTTGCTCATGCAGTAAATAGATTAGAACTAGGCTTCTGGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               382-619, - strand, RNAz p=0.760567

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               382-619, - strand, RNAz p=0.760567

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_012247, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_012247, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               267-634, gnl|bosTau2|chr13 (15340634-15340272)
               

               
               267-634, gnl|Hg17|chr10 (13400998-13401354)
               

               
               267-634, gnl|Mm7|chr2 (4824216-4823861)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               267-634, gnl|bosTau2|chr13 (15340634-15340272)
               

               
               267-634, gnl|Hg17|chr10 (13400998-13401354)
               

               
               267-634, gnl|Mm7|chr2 (4824216-4823861)

	267-634, gnl\|bosTau2\|chr13 (15340634-15340272)
	267-634, gnl\|Hg17\|chr10 (13400998-13401354)
	267-634, gnl\|Mm7\|chr2 (4824216-4823861)