Non-Coding RNA Search

Utr1-UTR01F070104

Sequence:


               
               TAACTCGATTGTAACTCTGTTTCCTTTTTTGGCTTGGTGGTAAAACCGTTTCACAAAGTC
TCTAAGACGGTCTACTAATGCGTAGAGGGTTTTTTAAAGCAATTACTCACGTCTCTGACC
TAGCGAATCAGTCACAGTCACCATAGGCTGCAAAGAGAGAACCATAGATATTTCCTTGAA
GGTAGGTGTTCTGGGTGGTATCTGTAGCTGCTCTCTTGCTCGAGCGGATAGAATAGAGTT
TTGGAGCTCTGATGACCTCAGGATTTCTATTCTCCATGCCTAAGGTTGCCGTCTCTGTTT
TCCTGTCTTTTTAACTCATTTCTAGTCAGCTCTTGTGTTTTTTAGTCGTGCCATCTTTGC
CTTGTTCATGTGTGACACTAAAAAACTCACTTTTCAAACGTAACCTTCCCCGCGGGCTGC
CTTCCCTCCTAACGAAAACCCTCTTTCCCATCTTTTCTCTCTTGAACCAGACTAATCTAG
AGAAAGATCTCAACCTCTGCCCAACAGAGTTAGAGGCAGATTTAGGAAAAACGGAGCCGC
TTACTAAAGCACCCAGTGCAAACCTGTCACAGGTACTTCCGAGTTTTTCTCCTGCCCTCT
CCCTCATTCCCTTTGCTTTCCTCCCTGTTCCATGGTTTTTGATGGAGTCGAGGTGATGGA
CGGATATGCCGGTTATTTTTAAGGTGCATGGCTTTCGGACTCTTGTTCAGCTCCCCGCCC
CCACCCCTCAACTGAATTTTTGCTTGGATTTCTCGAGCTTGGCATCTTCCTTAAAGGGGA
TTTTTCAAATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAACTCGATTGTAACTCTGTTTCCTTTTTTGGCTTGGTGGTAAAACCGTTTCACAAAGTC
TCTAAGACGGTCTACTAATGCGTAGAGGGTTTTTTAAAGCAATTACTCACGTCTCTGACC
TAGCGAATCAGTCACAGTCACCATAGGCTGCAAAGAGAGAACCATAGATATTTCCTTGAA
GGTAGGTGTTCTGGGTGGTATCTGTAGCTGCTCTCTTGCTCGAGCGGATAGAATAGAGTT
TTGGAGCTCTGATGACCTCAGGATTTCTATTCTCCATGCCTAAGGTTGCCGTCTCTGTTT
TCCTGTCTTTTTAACTCATTTCTAGTCAGCTCTTGTGTTTTTTAGTCGTGCCATCTTTGC
CTTGTTCATGTGTGACACTAAAAAACTCACTTTTCAAACGTAACCTTCCCCGCGGGCTGC
CTTCCCTCCTAACGAAAACCCTCTTTCCCATCTTTTCTCTCTTGAACCAGACTAATCTAG
AGAAAGATCTCAACCTCTGCCCAACAGAGTTAGAGGCAGATTTAGGAAAAACGGAGCCGC
TTACTAAAGCACCCAGTGCAAACCTGTCACAGGTACTTCCGAGTTTTTCTCCTGCCCTCT
CCCTCATTCCCTTTGCTTTCCTCCCTGTTCCATGGTTTTTGATGGAGTCGAGGTGATGGA
CGGATATGCCGGTTATTTTTAAGGTGCATGGCTTTCGGACTCTTGTTCAGCTCCCCGCCC
CCACCCCTCAACTGAATTTTTGCTTGGATTTCTCGAGCTTGGCATCTTCCTTAAAGGGGA
TTTTTCAAATATA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               434-593, - strand, RNAz p=0.872533

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               434-593, - strand, RNAz p=0.872533

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-742, gnl|bosTau2|chr26 (10842564-10843280)
               

               
               2-742, gnl|Hg17|chr10 (97121615-97120893)
               

               
               2-742, gnl|Mm7|chr19 (40234366-40233684)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-742, gnl|bosTau2|chr26 (10842564-10843280)
               

               
               2-742, gnl|Hg17|chr10 (97121615-97120893)
               

               
               2-742, gnl|Mm7|chr19 (40234366-40233684)

	2-742, gnl\|bosTau2\|chr26 (10842564-10843280)
	2-742, gnl\|Hg17\|chr10 (97121615-97120893)
	2-742, gnl\|Mm7\|chr19 (40234366-40233684)