Non-Coding RNA Search

Utr1-UTR01G120105

Sequence:


               
               AGTGAAATTTTCTGGTGTTAGCCGTGGTTAGGGAATAACTGGGGCTATGCTTTAGATTCC
TCTCCAAAATGCTTCAACTTCATGGAGAGATGGGAATCACTGATACGGAACATGGCGAAG
ACTTCCACAGCTGCTTGGGTTCTCAGCCAGACTTGGCCACGTACCAGCTGTAGGCCTTTA
GGCAGGTGAGCTAAGCTCTCGGAATCTCCGTTGCCTCCCTGGTCTGGTAGGATTCAGAGC
ACCTATTTCATAGGGTGGTTGTGAGGAAGAAACAAGGTGCTATGTAAGCAAGGAGCACAT
GGTAAGCAAGGAGCACAGGTGTGCTGCCATCCTTACTGCCCAAAACTGTCAGAGTAGGAG
GGGTCTCCAGGGATCACCTGATTCCAAGCTTCTCCACAGATGCCCAGAAGGGTGTGGAGA
GAGGCTTGGGGTAGCACAGTGTGTATATATTATGAATTTTTTGCATGTCAGCATTCTTCC
ATGGGAAAAGTAGACTTTATGTCTATCACGGTGGGGTCCAAGTATTTTAATAAAGCTGAg
gagttcccattgtggctcagtgggttaaaaacccgacagtgtctgtgaggattcagattc
aatccttggcctcgctcagtgggttggggatccggtgttgccgcaagctgtggtataggt
tccagatacggcttggatctggcattgctgtggttgtgatgtaggctggcagctgtagct
ctgatttggaccctcagcctgggaacttccatatgc

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGAAATTTTCTGGTGTTAGCCGTGGTTAGGGAATAACTGGGGCTATGCTTTAGATTCC
TCTCCAAAATGCTTCAACTTCATGGAGAGATGGGAATCACTGATACGGAACATGGCGAAG
ACTTCCACAGCTGCTTGGGTTCTCAGCCAGACTTGGCCACGTACCAGCTGTAGGCCTTTA
GGCAGGTGAGCTAAGCTCTCGGAATCTCCGTTGCCTCCCTGGTCTGGTAGGATTCAGAGC
ACCTATTTCATAGGGTGGTTGTGAGGAAGAAACAAGGTGCTATGTAAGCAAGGAGCACAT
GGTAAGCAAGGAGCACAGGTGTGCTGCCATCCTTACTGCCCAAAACTGTCAGAGTAGGAG
GGGTCTCCAGGGATCACCTGATTCCAAGCTTCTCCACAGATGCCCAGAAGGGTGTGGAGA
GAGGCTTGGGGTAGCACAGTGTGTATATATTATGAATTTTTTGCATGTCAGCATTCTTCC
ATGGGAAAAGTAGACTTTATGTCTATCACGGTGGGGTCCAAGTATTTTAATAAAGCTGAg
gagttcccattgtggctcagtgggttaaaaacccgacagtgtctgtgaggattcagattc
aatccttggcctcgctcagtgggttggggatccggtgttgccgcaagctgtggtataggt
tccagatacggcttggatctggcattgctgtggttgtgatgtaggctggcagctgtagct
ctgatttggaccctcagcctgggaacttccatatgc

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               355-473, + strand, RNAz p=0.539787

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               355-473, + strand, RNAz p=0.539787

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               2-513, gnl|bosTau2|chrX (23473822-23474344)
               

               
               2-513, gnl|Hg17|chrX (71078362-71079208)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-513, gnl|bosTau2|chrX (23473822-23474344)
               

               
               2-513, gnl|Hg17|chrX (71078362-71079208)

	2-513, gnl\|bosTau2\|chrX (23473822-23474344)
	2-513, gnl\|Hg17\|chrX (71078362-71079208)