Non-Coding RNA Search

Utr1-UTR01H070101

Sequence:


               
               ATCCTTTACTTCCCCATCCTATGGTGTTTCATTGAGACATGCCCTTCCTAGCACCTTCAT
TTTTTAAAAAATGCCAGCTTTAGGGAGataattcacctatcataaaattcacccatttga
aatgtacaattcattggtttttagcatattcacaaggttttgcaagttacaccacaatTG
ACTGTAGAATATTGTCATCTAGAGTATCACCTTGTGTCTATCAGTAATCACTCCCTATCT
ACCCAAACCCCTTTGCTAATCCTAGACAATCATTAGTCTATTCATGAACATTTGGTTTTT
TCCACTGTTGTGAATAATTACGGTATGAACACTCATGTATGAGTGTCCGTTTGCACATGC
TTTCATTTATGTTTTGTATGTCTCGGGGGGTAgaattgctgagtgatatattattctaca
tttaatcttctgaacaactgccagagtgttttccaaagtggctgcaccattttacgtttg
gcagtgtacgagggttccagtttttccatattcttgccaacatatctgtcttttttatta
tagccatactagaaggtgtaacatggtatctcgtggttttgatttgtatttcctgattac
taatgatattgagcatcttttcatttttgcttacggccatttgtatatcatctttgAACG
ACTGTCCCTTCAGGTCAGTTCTCCATTTTTTTTAGCTGAGTTATTTATCTTTTTATTATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCCTTTACTTCCCCATCCTATGGTGTTTCATTGAGACATGCCCTTCCTAGCACCTTCAT
TTTTTAAAAAATGCCAGCTTTAGGGAGataattcacctatcataaaattcacccatttga
aatgtacaattcattggtttttagcatattcacaaggttttgcaagttacaccacaatTG
ACTGTAGAATATTGTCATCTAGAGTATCACCTTGTGTCTATCAGTAATCACTCCCTATCT
ACCCAAACCCCTTTGCTAATCCTAGACAATCATTAGTCTATTCATGAACATTTGGTTTTT
TCCACTGTTGTGAATAATTACGGTATGAACACTCATGTATGAGTGTCCGTTTGCACATGC
TTTCATTTATGTTTTGTATGTCTCGGGGGGTAgaattgctgagtgatatattattctaca
tttaatcttctgaacaactgccagagtgttttccaaagtggctgcaccattttacgtttg
gcagtgtacgagggttccagtttttccatattcttgccaacatatctgtcttttttatta
tagccatactagaaggtgtaacatggtatctcgtggttttgatttgtatttcctgattac
taatgatattgagcatcttttcatttttgcttacggccatttgtatatcatctttgAACG
ACTGTCCCTTCAGGTCAGTTCTCCATTTTTTTTAGCTGAGTTATTTATCTTTTTATTATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               575-719, - strand, RNAz p=0.90697

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               575-719, - strand, RNAz p=0.90697

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

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               21-369, gnl|bosTau2|chrX (68223-67873)
               


               
               390-719, gnl|bosTau2|chrX (67560-67226)
               

               
               390-719, gnl|canFam2|chrX (93240262-93240892)
               

               
               390-719, gnl|hg17|chrX (116850157-116850917)
               

               
               390-719, gnl|Hg17|chrX (116850960-116850569)
               

               
               390-719, gnl|panTro1|chrX (120807641-120808402)
               

               
               390-719, gnl|rheMac2|chrX (116224580-116225313)
               

               
               390-719, gnl|rn3|chrX (10385233-10384509)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-369, gnl|bosTau2|chrX (68223-67873)
               


               
               390-719, gnl|bosTau2|chrX (67560-67226)
               

               
               390-719, gnl|canFam2|chrX (93240262-93240892)
               

               
               390-719, gnl|hg17|chrX (116850157-116850917)
               

               
               390-719, gnl|Hg17|chrX (116850960-116850569)
               

               
               390-719, gnl|panTro1|chrX (120807641-120808402)
               

               
               390-719, gnl|rheMac2|chrX (116224580-116225313)
               

               
               390-719, gnl|rn3|chrX (10385233-10384509)

	21-369, gnl\|bosTau2\|chrX (68223-67873)

	390-719, gnl\|bosTau2\|chrX (67560-67226)
	390-719, gnl\|canFam2\|chrX (93240262-93240892)
	390-719, gnl\|hg17\|chrX (116850157-116850917)
	390-719, gnl\|Hg17\|chrX (116850960-116850569)
	390-719, gnl\|panTro1\|chrX (120807641-120808402)
	390-719, gnl\|rheMac2\|chrX (116224580-116225313)
	390-719, gnl\|rn3\|chrX (10385233-10384509)