Non-Coding RNA Search

Utr1-UTR01H080098

Sequence:


               
               TTTTTAGTATCAGTTATACCTACAGTTACTTACCCTCATCAGGATGAATTCTGAGTTTAC
GTAAAATTTTGAGATCTAAACAGGCTTTATTGACTTCAGGTGTATGACCTAAAGTCATCG
AAATATACAAGAGACAGTTTTATGTTGCTGACTGCCGTTTATCACAGTGGAGACACAGAT
CCTCAGATACCCACGTGCTGTTTGGGTACCTGAGGCAGAGCCGTGGAGGGCGGAGTGCTG
AGCTAGAGGCACAGACGGGTGGAAGCAGAGCCGGTCTCGAGAGGGACTGAGGATCTGTGT
CTCCTAAGTGCTGGGCAGAGCGCAGCGAGGGCAAAGGGCAGACCCCGGGAGAGTAGCAGT
CATGGCCCAGGCCGCCGGAGACAGGTGGGAAGCCCCCCGCCACACGCCGTGTTGGTTGGA
GGAAACGCCGATTTGTCACCGCAGACTCTCAGAGGCTGCGTCCTTGGAAGTGATCGTTTC
GTATTTGGTTGAAGACTTCGAATCAGGGACTGGCGTCTAGGTCTCCACTCTTTGCCATGC
ACTTTCCACTCTAGCACGGCTCCTTCGCTGTCAATAAAAATGCAAATAAACTTGGACCTC
TGTGGAGCTCCTTCAAGGCCGATTAACAGGGTCAGGCGTGGGCAGTGGATTTGCCAGTGA
ACAGAAGCCCTCTGATACCATAAGCCACTTGAAATGTCTGGAGGAAAACTTAAGCAGTTA
ATTTTATAAATTGCTCGCTGTGCTTCCTTTAACTCCCAAATGTTTAAACTTAGTCCAACG
AGTGCTTAGCTGATGTTGTTTTCCCTTCTTAATACTGGATATCTCCATCATTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTAGTATCAGTTATACCTACAGTTACTTACCCTCATCAGGATGAATTCTGAGTTTAC
GTAAAATTTTGAGATCTAAACAGGCTTTATTGACTTCAGGTGTATGACCTAAAGTCATCG
AAATATACAAGAGACAGTTTTATGTTGCTGACTGCCGTTTATCACAGTGGAGACACAGAT
CCTCAGATACCCACGTGCTGTTTGGGTACCTGAGGCAGAGCCGTGGAGGGCGGAGTGCTG
AGCTAGAGGCACAGACGGGTGGAAGCAGAGCCGGTCTCGAGAGGGACTGAGGATCTGTGT
CTCCTAAGTGCTGGGCAGAGCGCAGCGAGGGCAAAGGGCAGACCCCGGGAGAGTAGCAGT
CATGGCCCAGGCCGCCGGAGACAGGTGGGAAGCCCCCCGCCACACGCCGTGTTGGTTGGA
GGAAACGCCGATTTGTCACCGCAGACTCTCAGAGGCTGCGTCCTTGGAAGTGATCGTTTC
GTATTTGGTTGAAGACTTCGAATCAGGGACTGGCGTCTAGGTCTCCACTCTTTGCCATGC
ACTTTCCACTCTAGCACGGCTCCTTCGCTGTCAATAAAAATGCAAATAAACTTGGACCTC
TGTGGAGCTCCTTCAAGGCCGATTAACAGGGTCAGGCGTGGGCAGTGGATTTGCCAGTGA
ACAGAAGCCCTCTGATACCATAAGCCACTTGAAATGTCTGGAGGAAAACTTAAGCAGTTA
ATTTTATAAATTGCTCGCTGTGCTTCCTTTAACTCCCAAATGTTTAAACTTAGTCCAACG
AGTGCTTAGCTGATGTTGTTTTCCCTTCTTAATACTGGATATCTCCATCATTCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               164-267, - strand, RNAz p=0.607647

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               164-267, - strand, RNAz p=0.607647

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-835, gnl|bosTau2|chr18 (17789041-17789915)
               

               
               1-835, gnl|Hg17|chr16 (48818362-48819217)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-835, gnl|bosTau2|chr18 (17789041-17789915)
               

               
               1-835, gnl|Hg17|chr16 (48818362-48819217)

	1-835, gnl\|bosTau2\|chr18 (17789041-17789915)
	1-835, gnl\|Hg17\|chr16 (48818362-48819217)