Non-Coding RNA Search

Utr1-UTR01H090096

Sequence:


               
               CTACTGAACAAGCCTCATGCAAGCAGGGGACTTCGATTTTTCTCCACACAGGCCATGTCC
CACAGTGGGACACGGCCATGAGTCCAAGAAGCAATTTCCTCTTGAAATCTCCCCTTTCCT
TCTCTCCTCCTAGGCTTAGTTGGTTTGATGCTCCCAGGAACAGCCTCTGGTTTTGGAAAA
GAACTATCTGGAACCTCACTTTGGGAAACAGAAAACAGTCTAATAAACAGAGCTTTTGCC
TTCCTTCTGTACTCTGACACTACACTGCCAATGATCAAATTGACTGGCTTGGTTATTTTT
TTGGCAGAAGGGATTGGGGGGAGATCCTGGCTAGGGTACCCAGGGGATAAGTTAATTAGC
ACAGTTTGGCAGAGCCCTCAAGCTGCCTCTAGAAGCAGAACAACAGAATCATTGTTGCCA
ACCTTGGCTGCAAGTGGTGAGGCCCAGAGGTGGGATCCAGGAGATCGTGTCCTGGGACCA
GGCATGAGGAGGGTACCCCCGAGGACCCACAGAAATGCGGACACCCTCAGCTTCGCCAGC
TGCTTGGGCAGTGAAAATAGTTGGCAGCATACAGTTTAGAGACTTGGAGGCTGAGTGCCC
ATCCTTAGCCATGGGTGAGGACTGCAGTGGGAAATCCCAGTCCTGGAAGACCAGGGTCCA
CCCAGAGCCCGGCTGAGAGGCTGGCTTCTGCTCTAAGTGCTTCTCTCTGCCCCCAGGAGC
ACCGAGGGCTGCTCTCCATCCGCTACCCCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACTGAACAAGCCTCATGCAAGCAGGGGACTTCGATTTTTCTCCACACAGGCCATGTCC
CACAGTGGGACACGGCCATGAGTCCAAGAAGCAATTTCCTCTTGAAATCTCCCCTTTCCT
TCTCTCCTCCTAGGCTTAGTTGGTTTGATGCTCCCAGGAACAGCCTCTGGTTTTGGAAAA
GAACTATCTGGAACCTCACTTTGGGAAACAGAAAACAGTCTAATAAACAGAGCTTTTGCC
TTCCTTCTGTACTCTGACACTACACTGCCAATGATCAAATTGACTGGCTTGGTTATTTTT
TTGGCAGAAGGGATTGGGGGGAGATCCTGGCTAGGGTACCCAGGGGATAAGTTAATTAGC
ACAGTTTGGCAGAGCCCTCAAGCTGCCTCTAGAAGCAGAACAACAGAATCATTGTTGCCA
ACCTTGGCTGCAAGTGGTGAGGCCCAGAGGTGGGATCCAGGAGATCGTGTCCTGGGACCA
GGCATGAGGAGGGTACCCCCGAGGACCCACAGAAATGCGGACACCCTCAGCTTCGCCAGC
TGCTTGGGCAGTGAAAATAGTTGGCAGCATACAGTTTAGAGACTTGGAGGCTGAGTGCCC
ATCCTTAGCCATGGGTGAGGACTGCAGTGGGAAATCCCAGTCCTGGAAGACCAGGGTCCA
CCCAGAGCCCGGCTGAGAGGCTGGCTTCTGCTCTAAGTGCTTCTCTCTGCCCCCAGGAGC
ACCGAGGGCTGCTCTCCATCCGCTACCCCATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-149, - strand, RNAz p=0.999998

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-149, - strand, RNAz p=0.999998

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-617, gnl|bosTau2|chr26 (14053966-14054559)
               

               
               1-617, gnl|Hg17|chr10 (104238796-104238155)
               

               
               1-617, gnl|Mm7|chr19 (46281633-46281098)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-617, gnl|bosTau2|chr26 (14053966-14054559)
               

               
               1-617, gnl|Hg17|chr10 (104238796-104238155)
               

               
               1-617, gnl|Mm7|chr19 (46281633-46281098)

	1-617, gnl\|bosTau2\|chr26 (14053966-14054559)
	1-617, gnl\|Hg17\|chr10 (104238796-104238155)
	1-617, gnl\|Mm7\|chr19 (46281633-46281098)