Non-Coding RNA Search

Utr1-UTR01H100104

Sequence:


               
               ACTGCTGGGGCTAAGACTCAGAGAGTGTTTAATGCCTTGTCCAGATCACCACAGCCAGTA
AATTCCAACCCAGACCTGTGTAATTCCAAGCCAGTCCTGTGAATAATCAAGTAAATATGA
CTGTGAGTGGAGCTGGACTGGCAGCCTGTGTGCACAGGCAGGTGGAAGCAGAGAGGATTC
ATCCAGACAGGCTGAAGACTGGTACCAAGGACAGGCTTTGTTTTAGATCTGCCGTAGTGA
CACTCATGTGACAGAAAGGATGGGTAGTAGTCCAATAAATCCTTTACCCCAGGGAATTGA
TGGGTCTTCTGGGTGCTGGCCAGCATCCTGAGTGCAAACTACAAACACAGGGTGGCTTCT
ATCTTCATCATGGTCCCAGCTCCCTAGCATAGCTCTCGTCTCTATTTTAGCTTATAAATT
CATATTGTGATTAAGACAAGTATGGAAATTGATGTCGTTTCAGCTTCTTCATGAATTGAA
ACACATTTTTATTTAAGCATGAACTTTCCCATCTCATGGATCAAAAAGAGGCTCTGGAAG
AGAAGCACCCATAAGTACTTGAGGCTTAATGAAGGCTATCTAGTTGATAATATCCCACAT
TATTACAAATAAAAAAAAAAAGTAGCATTTGACTCCAAAGATACATCCCATTAAAAACCA
ATAACAGggagttcccgtcgtggcgcagtggttaacgaatccgactaggaaccatgaggt
tgcgggttcggtccctgcccttgct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGCTGGGGCTAAGACTCAGAGAGTGTTTAATGCCTTGTCCAGATCACCACAGCCAGTA
AATTCCAACCCAGACCTGTGTAATTCCAAGCCAGTCCTGTGAATAATCAAGTAAATATGA
CTGTGAGTGGAGCTGGACTGGCAGCCTGTGTGCACAGGCAGGTGGAAGCAGAGAGGATTC
ATCCAGACAGGCTGAAGACTGGTACCAAGGACAGGCTTTGTTTTAGATCTGCCGTAGTGA
CACTCATGTGACAGAAAGGATGGGTAGTAGTCCAATAAATCCTTTACCCCAGGGAATTGA
TGGGTCTTCTGGGTGCTGGCCAGCATCCTGAGTGCAAACTACAAACACAGGGTGGCTTCT
ATCTTCATCATGGTCCCAGCTCCCTAGCATAGCTCTCGTCTCTATTTTAGCTTATAAATT
CATATTGTGATTAAGACAAGTATGGAAATTGATGTCGTTTCAGCTTCTTCATGAATTGAA
ACACATTTTTATTTAAGCATGAACTTTCCCATCTCATGGATCAAAAAGAGGCTCTGGAAG
AGAAGCACCCATAAGTACTTGAGGCTTAATGAAGGCTATCTAGTTGATAATATCCCACAT
TATTACAAATAAAAAAAAAAAGTAGCATTTGACTCCAAAGATACATCCCATTAAAAACCA
ATAACAGggagttcccgtcgtggcgcagtggttaacgaatccgactaggaaccatgaggt
tgcgggttcggtccctgcccttgct

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               80-197, + strand, RNAz p=0.722234

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-197, + strand, RNAz p=0.722234

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-609, gnl|bosTau2|chr9 (32820896-32821497)
               

               
               11-609, gnl|Hg17|chr6 (90999996-90999376)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-609, gnl|bosTau2|chr9 (32820896-32821497)
               

               
               11-609, gnl|Hg17|chr6 (90999996-90999376)

	11-609, gnl\|bosTau2\|chr9 (32820896-32821497)
	11-609, gnl\|Hg17\|chr6 (90999996-90999376)