Non-Coding RNA Search

Utr1-UTR01H110102

Sequence:


               
               AATATAGCTCAGTGCAAGCGTCTGGAGGGGGGGCTGGACAAGCTGAAGGAGGCCACCATC
CAGCTGGATGAGCTGAACCAGAAGCTGGCCGAGCAGAAGATCGTGCTGGCAGAGAAGTCA
GCTGCCTGCGAGGCCCTGCTGGAGGAGATCGCCACCAACACCGCCATAGCGGAGGAAAAG
AAGAAACTGGCGGAAGAAAAAGCCATGGAGATAGAGGAGCAAAACAAGATCATCGCGGTG
GAGAAGACGGAGGCTGAAACAGCCCTTGCCGAGGTCATGCCGATCCTGGAAGCCGCCAAG
CTGGAGCTGCAGAAGCTGGACAAATCAGGTGTGACCGAGATTAGGTCCTTTGCTAAGCCC
CCGAAGCAGGTGCAGACCGTCTGCGAGTGCATCCTCATCATGAAGGGGTACAAAGAGCTC
AACTGGAAAACTGCCAAAGGCATGATGTCCGACCCGAACTTCCTGAGGTCCCTGATGGAG
ATTGATTTTGATTCCATCACCCAGGGCCAAGTTAAAAATATCCGAGGCCTCTTGAAGACT
CTTAATACCACGACTGAGGAAATGGAAGCTGTGAGCAAGGCAGGCCTGGGGATGCTGAAA
TTTGTTGAAGCTGTCATGGGCTACTGTGATGTTTTTAGAGAAATCAAGCCCAAAAGAGAC
AAGGTATTACCCACCCTTGATACCTACACACTTCTGCCAAGAGACCATTTTGAAGTCAAA
ATTAATGTATCCACAGCTTTACTGGAGAAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATATAGCTCAGTGCAAGCGTCTGGAGGGGGGGCTGGACAAGCTGAAGGAGGCCACCATC
CAGCTGGATGAGCTGAACCAGAAGCTGGCCGAGCAGAAGATCGTGCTGGCAGAGAAGTCA
GCTGCCTGCGAGGCCCTGCTGGAGGAGATCGCCACCAACACCGCCATAGCGGAGGAAAAG
AAGAAACTGGCGGAAGAAAAAGCCATGGAGATAGAGGAGCAAAACAAGATCATCGCGGTG
GAGAAGACGGAGGCTGAAACAGCCCTTGCCGAGGTCATGCCGATCCTGGAAGCCGCCAAG
CTGGAGCTGCAGAAGCTGGACAAATCAGGTGTGACCGAGATTAGGTCCTTTGCTAAGCCC
CCGAAGCAGGTGCAGACCGTCTGCGAGTGCATCCTCATCATGAAGGGGTACAAAGAGCTC
AACTGGAAAACTGCCAAAGGCATGATGTCCGACCCGAACTTCCTGAGGTCCCTGATGGAG
ATTGATTTTGATTCCATCACCCAGGGCCAAGTTAAAAATATCCGAGGCCTCTTGAAGACT
CTTAATACCACGACTGAGGAAATGGAAGCTGTGAGCAAGGCAGGCCTGGGGATGCTGAAA
TTTGTTGAAGCTGTCATGGGCTACTGTGATGTTTTTAGAGAAATCAAGCCCAAAAGAGAC
AAGGTATTACCCACCCTTGATACCTACACACTTCTGCCAAGAGACCATTTTGAAGTCAAA
ATTAATGTATCCACAGCTTTACTGGAGAAATTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               6-124, + strand, RNAz p=0.661716

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               6-124, + strand, RNAz p=0.661716

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               6-169, gnl|bosTau2|chr17 (26853459-26853622)
               

               
               6-169, gnl|Hg17|chr12 (122908078-122908241)
               

               
               6-169, gnl|Mm7|chr5 (124046805-124046968)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-169, gnl|bosTau2|chr17 (26853459-26853622)
               

               
               6-169, gnl|Hg17|chr12 (122908078-122908241)
               

               
               6-169, gnl|Mm7|chr5 (124046805-124046968)

	6-169, gnl\|bosTau2\|chr17 (26853459-26853622)
	6-169, gnl\|Hg17\|chr12 (122908078-122908241)
	6-169, gnl\|Mm7\|chr5 (124046805-124046968)