Non-Coding RNA Search

Utr2-C0001788_E02

Sequence:


               
               CTTTCCCGGCCCGGAATCGGAATCGTGCCCCCAGCCACCGCCCCCAAGCCCCTGAGCCCC
CTCGATGGGCCGGCTTGGCCCAGTGTCATGCTGGACAGAGATGCCCAACAGATAGCGGAG
GACAGTGGAAATGCAGGCTTAGACTTCCTTAAGAGATGTGTATGCAGACCCGGGCCCTGC
GGATACTGGCGCCTCTGACTCCTTTGGCCCGGAGCACCTCACCTCTGATCCACAGCACCG
GAAAGCAGCATGGTCAGGAGCCGCTAAACTTCGGCTGAAGCACAGCTCCTCCACCAGTGA
CCTCTCCAGCTACGACCATGCTTATCTGAGGCGGAGCCCTGACCAGTGCAGCTCCCAGGG
GAGCATGGAGAGCCTGGAGCCCAGCGGGGGATACCCAGCCTGCCACCTTCTCTCCCCGGC
CAAGTCCACCAGCAGCATCGACCAGCTCGGCCACCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCCCGGCCCGGAATCGGAATCGTGCCCCCAGCCACCGCCCCCAAGCCCCTGAGCCCC
CTCGATGGGCCGGCTTGGCCCAGTGTCATGCTGGACAGAGATGCCCAACAGATAGCGGAG
GACAGTGGAAATGCAGGCTTAGACTTCCTTAAGAGATGTGTATGCAGACCCGGGCCCTGC
GGATACTGGCGCCTCTGACTCCTTTGGCCCGGAGCACCTCACCTCTGATCCACAGCACCG
GAAAGCAGCATGGTCAGGAGCCGCTAAACTTCGGCTGAAGCACAGCTCCTCCACCAGTGA
CCTCTCCAGCTACGACCATGCTTATCTGAGGCGGAGCCCTGACCAGTGCAGCTCCCAGGG
GAGCATGGAGAGCCTGGAGCCCAGCGGGGGATACCCAGCCTGCCACCTTCTCTCCCCGGC
CAAGTCCACCAGCAGCATCGACCAGCTCGGCCACCTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               321-440, - strand, RNAz p=0.66697

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               321-440, - strand, RNAz p=0.66697

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               283-458, gnl|bosTau2|chr6 (47930880-47931055)
               

               
               283-458, gnl|Hg17|chr4 (78017090-78017262)
               

               
               283-458, gnl|Mm7|chr5 (92927224-92927400)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               283-458, gnl|bosTau2|chr6 (47930880-47931055)
               

               
               283-458, gnl|Hg17|chr4 (78017090-78017262)
               

               
               283-458, gnl|Mm7|chr5 (92927224-92927400)

	283-458, gnl\|bosTau2\|chr6 (47930880-47931055)
	283-458, gnl\|Hg17\|chr4 (78017090-78017262)
	283-458, gnl\|Mm7\|chr5 (92927224-92927400)