Non-Coding RNA Search

Utr2-C0001789_B06

Sequence:


               
               CAAACTTGAACAGGGGGTTCATTGTTTTGTTACGGACTTTATGCCACTTGGGGTCAGAGA
TTTGGCATCGTCTCAGTTTAAGAAACCACGTTTCCTATCCAATCCGAGGGGAAGGTGCTG
TACAGTTCATTCCTTTGCACCATTAGCCAATCTGTCTTTTATCAATAACTCAGATTCAGT
GACATGTTTATATTCACACTTGTACATTTTCTGTAAATACCAAGCGCTACTGATCCCCAT
GCCAAAATACAAGAGTATTATGGGATTGCTACCTGTATAAACATGGCACTGTGAACAGAA
TACTGTTAGTTTTAATACAAGAGAATGCATTTGTAAATATGGTATAGAGTTTATTAATAT
ACTATTGTTTGCAGATAAAGGCCTTAACTTTAAACATCTTTCATCTTCTGAAAGCTGCCC
AACCGAAATCCTCACAGATGTCCCTCTGAACTGCCTTCCCATGTCCATCTTTCTGCTTTC
CAGCTGAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAACTTGAACAGGGGGTTCATTGTTTTGTTACGGACTTTATGCCACTTGGGGTCAGAGA
TTTGGCATCGTCTCAGTTTAAGAAACCACGTTTCCTATCCAATCCGAGGGGAAGGTGCTG
TACAGTTCATTCCTTTGCACCATTAGCCAATCTGTCTTTTATCAATAACTCAGATTCAGT
GACATGTTTATATTCACACTTGTACATTTTCTGTAAATACCAAGCGCTACTGATCCCCAT
GCCAAAATACAAGAGTATTATGGGATTGCTACCTGTATAAACATGGCACTGTGAACAGAA
TACTGTTAGTTTTAATACAAGAGAATGCATTTGTAAATATGGTATAGAGTTTATTAATAT
ACTATTGTTTGCAGATAAAGGCCTTAACTTTAAACATCTTTCATCTTCTGAAAGCTGCCC
AACCGAAATCCTCACAGATGTCCCTCTGAACTGCCTTCCCATGTCCATCTTTCTGCTTTC
CAGCTGAGGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               237-355, + strand, RNAz p=0.656092

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               237-355, + strand, RNAz p=0.656092

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_018945, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_018945, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-490, gnl|bosTau2|chr9 (43904757-43904266)
               

               
               1-490, gnl|Hg17|chr6 (136555259-136555740)
               

               
               1-490, gnl|Mm7|chr10 (20124539-20124059)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-490, gnl|bosTau2|chr9 (43904757-43904266)
               

               
               1-490, gnl|Hg17|chr6 (136555259-136555740)
               

               
               1-490, gnl|Mm7|chr10 (20124539-20124059)

	1-490, gnl\|bosTau2\|chr9 (43904757-43904266)
	1-490, gnl\|Hg17\|chr6 (136555259-136555740)
	1-490, gnl\|Mm7\|chr10 (20124539-20124059)