Utr2-C0001789_N13
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAATTCCGTGTTCTATAGGTGCAGCCCAAAACAAATAAATAATAGCTCAATAATAATT CATTGAGCTGATAAATGAAAAGCAGAGACCTATAATCATCTTCCTTGTTGTAGAAAATAT TCTTTCATTATTCTGCCTAAGATTGAGTTAACTTTCTTGGTAGTTTCCATAATTGATAGT AGACATTAACCTTGTATGCAGATAAAAAAATTATGTCCTTTGTGTCTTGGCATTATTTAT TTCACCACTTCTTGCTTTCTGTTGTTTTTTGCTGAAATGAAACAGAAATGTATGGCCCAG ATAGATCTAAGAAATCCATGAGACGAGGGGAACAGTTCAAATGGTTTCTGTATGTTTTAA TTTAAATAAAAAAAAAATTTTTTTTGGTAAAGTAGCTAAGCTGAAGCAGCCAGCTGCAAA AGTTCCTAGAGGGACAAAGATATATAAAAAACAGATCAAGATTTGACTGACATAGTCTAG GAAATATTTTAATGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAATTCCGTGTTCTATAGGTGCAGCCCAAAACAAATAAATAATAGCTCAATAATAATT CATTGAGCTGATAAATGAAAAGCAGAGACCTATAATCATCTTCCTTGTTGTAGAAAATAT TCTTTCATTATTCTGCCTAAGATTGAGTTAACTTTCTTGGTAGTTTCCATAATTGATAGT AGACATTAACCTTGTATGCAGATAAAAAAATTATGTCCTTTGTGTCTTGGCATTATTTAT TTCACCACTTCTTGCTTTCTGTTGTTTTTTGCTGAAATGAAACAGAAATGTATGGCCCAG ATAGATCTAAGAAATCCATGAGACGAGGGGAACAGTTCAAATGGTTTCTGTATGTTTTAA TTTAAATAAAAAAAAAATTTTTTTTGGTAAAGTAGCTAAGCTGAAGCAGCCAGCTGCAAA AGTTCCTAGAGGGACAAAGATATATAAAAAACAGATCAAGATTTGACTGACATAGTCTAG GAAATATTTTAATGC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 379-476, + strand, RNAz p=0.986707 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 379-476, + strand, RNAz p=0.986707 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 61-326, gnl|bosTau2|chr3 (23930880-23930621) | |
| 61-326, gnl|Hg17|chr1 (115787589-115787849) | |
| 61-326, gnl|Mm7|chr3 (102073824-102073566) | |
| 379-494, gnl|bosTau2|chr3 (23930601-23930484) | |
| 379-494, gnl|canFam2|chr17 (56192312-56192683) | |
| 379-494, gnl|canFam2|chr17 (56192683-56192303) | |
| 379-494, gnl|dasNov1|scaffold_7617 (14517-14859) | |
| 379-494, gnl|dasNov1|scaffold_7617 (14859-14517) | |
| 379-494, gnl|echTel1|scaffold_44440 (828-1194) | |
| 379-494, gnl|echTel1|scaffold_44440 (1194-828) | |
| 379-494, gnl|hg17|chr1 (115787744-115788081) | |
| 379-494, gnl|Hg17|chr1 (115787885-115788021) | |
| 379-494, gnl|hg17|chr1_random (3299581-3299918) | |
| 379-494, gnl|mm7|chr3 (102073666-102073402) | |
| 379-494, gnl|mm7|chr3 (102073402-102073666) | |
| 379-494, gnl|oryCun1|scaffold_186119 (53175-53509) | |
| 379-494, gnl|oryCun1|scaffold_186119 (53509-53175) | |
| 379-494, gnl|panTro1|chr1 (115595527-115595864) | |
| 379-494, gnl|panTro1|chr1 (115595864-115595527) | |
| 379-494, gnl|rheMac2|chr1 (118512751-118513085) | |
| 379-494, gnl|rheMac2|chr1 (118513085-118512751) | |
| 379-494, gnl|rn3|chr2 (197348517-197348329) | |
| 379-494, gnl|rn3|chr2 (197348329-197348517) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 61-326, gnl|bosTau2|chr3 (23930880-23930621) | |
| 61-326, gnl|Hg17|chr1 (115787589-115787849) | |
| 61-326, gnl|Mm7|chr3 (102073824-102073566) | |
| 379-494, gnl|bosTau2|chr3 (23930601-23930484) | |
| 379-494, gnl|canFam2|chr17 (56192312-56192683) | |
| 379-494, gnl|canFam2|chr17 (56192683-56192303) | |
| 379-494, gnl|dasNov1|scaffold_7617 (14517-14859) | |
| 379-494, gnl|dasNov1|scaffold_7617 (14859-14517) | |
| 379-494, gnl|echTel1|scaffold_44440 (828-1194) | |
| 379-494, gnl|echTel1|scaffold_44440 (1194-828) | |
| 379-494, gnl|hg17|chr1 (115787744-115788081) | |
| 379-494, gnl|Hg17|chr1 (115787885-115788021) | |
| 379-494, gnl|hg17|chr1_random (3299581-3299918) | |
| 379-494, gnl|mm7|chr3 (102073666-102073402) | |
| 379-494, gnl|mm7|chr3 (102073402-102073666) | |
| 379-494, gnl|oryCun1|scaffold_186119 (53175-53509) | |
| 379-494, gnl|oryCun1|scaffold_186119 (53509-53175) | |
| 379-494, gnl|panTro1|chr1 (115595527-115595864) | |
| 379-494, gnl|panTro1|chr1 (115595864-115595527) | |
| 379-494, gnl|rheMac2|chr1 (118512751-118513085) | |
| 379-494, gnl|rheMac2|chr1 (118513085-118512751) | |
| 379-494, gnl|rn3|chr2 (197348517-197348329) | |
| 379-494, gnl|rn3|chr2 (197348329-197348517) |