Non-Coding RNA Search

Utr2-C0001795_G15

Sequence:


               
               GTGGAGAAGACAGTTCACCCGTTCATACTGGCACTTTCCTTTCAAATTCCTTAAAGAAGA
AATGTGAAGAAAGTGATTCTGAGTCACCTGCTACTTTCAGCACCGAAGAGCCATCGTTCT
ACCCCTGTACCAAGTGCAATGTGAATTTTAGGGAGAAAAAGCACCTCCACAGGCATATGA
TGTATCATTTAGATGGGAATAGTCACTTTCGCCACCTTAATGTCCCGAGACCATATGCTT
GTAGAGAATGTGGGCGGACGTTTCGAGATCGTAACTCACTACTAAAGCATATGATTATTC
ACCAAGAGAGAAGACAGAAGCTGATGGAGGAAATTCGTGAACTGAAAGAACTTCAGGACG
AAGGCAGAAGTGCCCGGTTGCAATGCCCGCAGTGTGTGTTTGGTACCAATTGCCCTAAAA
CGTTTGTGCAGCATGCTTAAACCCACGAAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGAGAAGACAGTTCACCCGTTCATACTGGCACTTTCCTTTCAAATTCCTTAAAGAAGA
AATGTGAAGAAAGTGATTCTGAGTCACCTGCTACTTTCAGCACCGAAGAGCCATCGTTCT
ACCCCTGTACCAAGTGCAATGTGAATTTTAGGGAGAAAAAGCACCTCCACAGGCATATGA
TGTATCATTTAGATGGGAATAGTCACTTTCGCCACCTTAATGTCCCGAGACCATATGCTT
GTAGAGAATGTGGGCGGACGTTTCGAGATCGTAACTCACTACTAAAGCATATGATTATTC
ACCAAGAGAGAAGACAGAAGCTGATGGAGGAAATTCGTGAACTGAAAGAACTTCAGGACG
AAGGCAGAAGTGCCCGGTTGCAATGCCCGCAGTGTGTGTTTGGTACCAATTGCCCTAAAA
CGTTTGTGCAGCATGCTTAAACCCACGAAAAAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               160-279, - strand, RNAz p=0.950886

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               160-279, - strand, RNAz p=0.950886

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               161-251, + strand, RNAmicro p=0.995197

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               161-251, + strand, RNAmicro p=0.995197

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-453, gnl|bosTau2|chr3 (43360448-43360900)
               

               
               1-453, gnl|Hg17|chr1 (91117823-91117371)
               

               
               1-453, gnl|Mm7|chr5 (105814582-105814130)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-453, gnl|bosTau2|chr3 (43360448-43360900)
               

               
               1-453, gnl|Hg17|chr1 (91117823-91117371)
               

               
               1-453, gnl|Mm7|chr5 (105814582-105814130)

	1-453, gnl\|bosTau2\|chr3 (43360448-43360900)
	1-453, gnl\|Hg17\|chr1 (91117823-91117371)
	1-453, gnl\|Mm7\|chr5 (105814582-105814130)