Non-Coding RNA Search

Utr2-C0001796_D21

Sequence:


               
               CAAGGCCGCAGGATGGGAACCGGGTCGCCGCGCAGCTGCGGCGCTGAGCTTGGCACACCG
GGTGTTCGACGGGGCGGGCTCCGGGCTGGATCCAGCGCTGTACAGGTATGGCCGCTGTGG
TGGGTCTCTGTGACTTCAAGGACCTCTCTTCTGGGTCGCCGTCTTTACCGTCTCAGAGAA
TGTCAGACAATTTTGTGTGTGCGTGGGGAGGGGGAGGCTAGACTTGGTTTCCTGGGTGCG
AGAGAAAATGAGGTGTCTGCCTAGTCCAGCTGGTCCCATTTGCTTTTCTCTGGTGGTGTC
TGAGAGAATGGAGTGTTCAGATTTGGGGACCCTTAACCTTGCCCCGGGATGAAAAATAGG
ATCTCCTCAGGCCCCGAAGATGCTCTGCGTTGCAGGGTGGTGAATGAGATCCCCCAGATT
TCCCAGCTCCATTCTTGGCCTTTAGCTGTGAGAGCCCCTCACTCTTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGGCCGCAGGATGGGAACCGGGTCGCCGCGCAGCTGCGGCGCTGAGCTTGGCACACCG
GGTGTTCGACGGGGCGGGCTCCGGGCTGGATCCAGCGCTGTACAGGTATGGCCGCTGTGG
TGGGTCTCTGTGACTTCAAGGACCTCTCTTCTGGGTCGCCGTCTTTACCGTCTCAGAGAA
TGTCAGACAATTTTGTGTGTGCGTGGGGAGGGGGAGGCTAGACTTGGTTTCCTGGGTGCG
AGAGAAAATGAGGTGTCTGCCTAGTCCAGCTGGTCCCATTTGCTTTTCTCTGGTGGTGTC
TGAGAGAATGGAGTGTTCAGATTTGGGGACCCTTAACCTTGCCCCGGGATGAAAAATAGG
ATCTCCTCAGGCCCCGAAGATGCTCTGCGTTGCAGGGTGGTGAATGAGATCCCCCAGATT
TCCCAGCTCCATTCTTGGCCTTTAGCTGTGAGAGCCCCTCACTCTTTGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               269-382, - strand, RNAz p=0.746115

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               269-382, - strand, RNAz p=0.746115

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-408, gnl|bosTau2|chr18 (41327723-41327323)
               

               
               5-408, gnl|Hg17|chr19 (45420999-45420637)
               

               
               5-408, gnl|Mm7|chr7 (24569366-24569743)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-408, gnl|bosTau2|chr18 (41327723-41327323)
               

               
               5-408, gnl|Hg17|chr19 (45420999-45420637)
               

               
               5-408, gnl|Mm7|chr7 (24569366-24569743)

	5-408, gnl\|bosTau2\|chr18 (41327723-41327323)
	5-408, gnl\|Hg17\|chr19 (45420999-45420637)
	5-408, gnl\|Mm7\|chr7 (24569366-24569743)