Utr2-C0001796_L12
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTATCAGCCACTAGTGCCGGTAATTGTCCCACAAAAAAATATATGCCAACTGTTACTTCA ACCCCAACTGTTAATGAAAATGAAACTAGTACAAGCAAATCTGTTTTTGAGCCTGAAGAT TCTTCAGTGGTAGATAATGAGTTGTGGTCAGAAATGCGAAGACATGAAATGTTAAGGGAA GAGCTGCGGCAGAGAAGAAAGCAGCTTGAAGCTCTGATGGCTGAACATCACAGGAGGCAA GGTCTGGCTGAAACTGTATCGCCAATGGCTGTTTCATTGAGAAGTGAGGGATCTGACAAT CTGTGTACGCCTCAGCAAAGTCGAACAGAAAAAACAATGGCAACTTGGGGGGGTTCTACC CAGTGTGCACTAGATGAAGAGGGAGATAAAGATGGTTACCTTTCTGAAGGAATAGTTCGG ACAGATGAAGAGGAAGAAGAGGAACAAGATGCCAGTTCCAATGATGACTTTTCTATGTAT CCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTATCAGCCACTAGTGCCGGTAATTGTCCCACAAAAAAATATATGCCAACTGTTACTTCA ACCCCAACTGTTAATGAAAATGAAACTAGTACAAGCAAATCTGTTTTTGAGCCTGAAGAT TCTTCAGTGGTAGATAATGAGTTGTGGTCAGAAATGCGAAGACATGAAATGTTAAGGGAA GAGCTGCGGCAGAGAAGAAAGCAGCTTGAAGCTCTGATGGCTGAACATCACAGGAGGCAA GGTCTGGCTGAAACTGTATCGCCAATGGCTGTTTCATTGAGAAGTGAGGGATCTGACAAT CTGTGTACGCCTCAGCAAAGTCGAACAGAAAAAACAATGGCAACTTGGGGGGGTTCTACC CAGTGTGCACTAGATGAAGAGGGAGATAAAGATGGTTACCTTTCTGAAGGAATAGTTCGG ACAGATGAAGAGGAAGAAGAGGAACAAGATGCCAGTTCCAATGATGACTTTTCTATGTAT CCT |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 140-298, + strand, RNAz p=0.925954 | |
| 189-298, - strand, RNAz p=0.716078 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 140-298, + strand, RNAz p=0.925954 | |
| 189-298, - strand, RNAz p=0.716078 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 140-332, gnl|bosTau2|chr27 (12357227-12357035) | |
| 140-332, gnl|canFam2|chr16 (44208245-44208374) | |
| 140-332, gnl|danRer3|chr1 (12444143-12444039) | |
| 140-332, gnl|dasNov1|scaffold_8080 (16312-16180) | |
| 140-332, gnl|echTel1|scaffold_324006 (68968-69113) | |
| 140-332, gnl|fr1|chrUn (18958032-18958150) | |
| 140-332, gnl|galGal2|chr4 (63322627-63322496) | |
| 140-332, gnl|hg17|chr8 (17864876-17865007) | |
| 140-332, gnl|Hg17|chr8 (17864888-17865080) | |
| 140-332, gnl|loxAfr1|scaffold_2329 (11620-11748) | |
| 140-332, gnl|mm7|chr8 (40068971-40069100) | |
| 140-332, gnl|Mm7|chr8 (40068981-40069173) | |
| 140-332, gnl|monDom2|scaffold_32 (12862194-12862073) | |
| 140-332, gnl|panTro1|chr7 (18658641-18658772) | |
| 140-332, gnl|rheMac2|chr8 (17852868-17852999) | |
| 140-332, gnl|rn3|chr16 (54373624-54373495) | |
| 140-332, gnl|tetNig1|chr18 (7687937-7688055) | |
| 140-332, gnl|xenTro1|scaffold_1260 (30024-30142) | |
| 333-483, gnl|bosTau2|chr27 (12356442-12356289) | |
| 333-483, gnl|Hg17|chr8 (17866357-17866507) | |
| 333-483, gnl|Mm7|chr8 (40071392-40071542) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 140-332, gnl|bosTau2|chr27 (12357227-12357035) | |
| 140-332, gnl|canFam2|chr16 (44208245-44208374) | |
| 140-332, gnl|danRer3|chr1 (12444143-12444039) | |
| 140-332, gnl|dasNov1|scaffold_8080 (16312-16180) | |
| 140-332, gnl|echTel1|scaffold_324006 (68968-69113) | |
| 140-332, gnl|fr1|chrUn (18958032-18958150) | |
| 140-332, gnl|galGal2|chr4 (63322627-63322496) | |
| 140-332, gnl|hg17|chr8 (17864876-17865007) | |
| 140-332, gnl|Hg17|chr8 (17864888-17865080) | |
| 140-332, gnl|loxAfr1|scaffold_2329 (11620-11748) | |
| 140-332, gnl|mm7|chr8 (40068971-40069100) | |
| 140-332, gnl|Mm7|chr8 (40068981-40069173) | |
| 140-332, gnl|monDom2|scaffold_32 (12862194-12862073) | |
| 140-332, gnl|panTro1|chr7 (18658641-18658772) | |
| 140-332, gnl|rheMac2|chr8 (17852868-17852999) | |
| 140-332, gnl|rn3|chr16 (54373624-54373495) | |
| 140-332, gnl|tetNig1|chr18 (7687937-7688055) | |
| 140-332, gnl|xenTro1|scaffold_1260 (30024-30142) | |
| 333-483, gnl|bosTau2|chr27 (12356442-12356289) | |
| 333-483, gnl|Hg17|chr8 (17866357-17866507) | |
| 333-483, gnl|Mm7|chr8 (40071392-40071542) |