Non-Coding RNA Search

Utr2-C0001799_E23

Sequence:


               
               TTAAACTGCATTTTTCAAGCCAGAGGAAGAGGTCACGAAAACCCTACATCTTATATCTGG
AGAGAATAAATATGCATTGACCACTTTCCACAAAGAGTGGAAAATGATAGCAGAGAAATC
CACAGTCATGACTGTGGAATTCTAGAAGATGCATCTAGAATCTTTTTAACTGGAATGTTA
ACCCGAAAGCCTTATTGGGAAAATTAAGAAGATTCAGGTCTCTAGGCCAGCTTTGTCTTT
TTCTCTTTCTTTGACTTTACAGTAAATCTGAGGAAACTTTTAATACTAAGGCTCCGTGTT
GCCTGGCCTCTGAGTCTAAAATGCCTGAGAAAGCACTGCAGATTCCAACTGTAAAACATT
CCTTCCCCAAGCCTTGGAAACTAGTGTACTAAGGCCGGCAGAGTTCAGAGGGAGCACATG
TAAATGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAACTGCATTTTTCAAGCCAGAGGAAGAGGTCACGAAAACCCTACATCTTATATCTGG
AGAGAATAAATATGCATTGACCACTTTCCACAAAGAGTGGAAAATGATAGCAGAGAAATC
CACAGTCATGACTGTGGAATTCTAGAAGATGCATCTAGAATCTTTTTAACTGGAATGTTA
ACCCGAAAGCCTTATTGGGAAAATTAAGAAGATTCAGGTCTCTAGGCCAGCTTTGTCTTT
TTCTCTTTCTTTGACTTTACAGTAAATCTGAGGAAACTTTTAATACTAAGGCTCCGTGTT
GCCTGGCCTCTGAGTCTAAAATGCCTGAGAAAGCACTGCAGATTCCAACTGTAAAACATT
CCTTCCCCAAGCCTTGGAAACTAGTGTACTAAGGCCGGCAGAGTTCAGAGGGAGCACATG
TAAATGAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-191, - strand, RNAz p=0.993677

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-191, - strand, RNAz p=0.993677

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-428, gnl|bosTau2|chr3 (57011484-57011042)
               

               
               1-428, gnl|Hg17|chr1 (61621762-61622192)
               

               
               1-428, gnl|Mm7|chr4 (97491886-97492319)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-428, gnl|bosTau2|chr3 (57011484-57011042)
               

               
               1-428, gnl|Hg17|chr1 (61621762-61622192)
               

               
               1-428, gnl|Mm7|chr4 (97491886-97492319)

	1-428, gnl\|bosTau2\|chr3 (57011484-57011042)
	1-428, gnl\|Hg17\|chr1 (61621762-61622192)
	1-428, gnl\|Mm7\|chr4 (97491886-97492319)