Non-Coding RNA Search

Utr2-C0001801_F23

Sequence:


               
               GTCCGTATAGGGTGGGGGTACCTGAAAGAAATGAGACTTCATCAGTCTTGAAGGAAATTT
TCCAGAGCCAATATTTGGAAAAGAACAATTTTTCTAAGGGAGTTTTATAAGGAGGAATGT
AGTGTTTTCCTCATAATGAGTTTATTTTGTTTTCCTGTAGACTCATGAAATGTTTGGTTG
CCATGTGAAAATTAAAACTTAGAAAGAAGGGGTGTGTAATCCAATCTGCACAGACCTGAA
CTAGTCTCATGCTCTTCACACCTTATCGGACCTTCCTTTGATGCCCATGATAAAGATGAA
CTAATGTATAGAAAAGCATTTCATAAAAAAAGGGAGCCATACGAGTTATGGCTTTCTGTT
TTAAGATTATCACACACATCGTTTTTGCAATATTTTTTACTCCTTTTGAATTCCCTGGTG
ATTTTAAATCTGAATAACTGAAATCCTTTGGAAAGATGAAAGCAAGAACACTCTGCAATC
CATGTAGATATGCCACTGGAATGATAAATCTAGTACATGCACTGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCGTATAGGGTGGGGGTACCTGAAAGAAATGAGACTTCATCAGTCTTGAAGGAAATTT
TCCAGAGCCAATATTTGGAAAAGAACAATTTTTCTAAGGGAGTTTTATAAGGAGGAATGT
AGTGTTTTCCTCATAATGAGTTTATTTTGTTTTCCTGTAGACTCATGAAATGTTTGGTTG
CCATGTGAAAATTAAAACTTAGAAAGAAGGGGTGTGTAATCCAATCTGCACAGACCTGAA
CTAGTCTCATGCTCTTCACACCTTATCGGACCTTCCTTTGATGCCCATGATAAAGATGAA
CTAATGTATAGAAAAGCATTTCATAAAAAAAGGGAGCCATACGAGTTATGGCTTTCTGTT
TTAAGATTATCACACACATCGTTTTTGCAATATTTTTTACTCCTTTTGAATTCCCTGGTG
ATTTTAAATCTGAATAACTGAAATCCTTTGGAAAGATGAAAGCAAGAACACTCTGCAATC
CATGTAGATATGCCACTGGAATGATAAATCTAGTACATGCACTGAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               58-175, + strand, RNAz p=0.998897

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               58-175, + strand, RNAz p=0.998897

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               58-528, gnl|bosTau2|chr17 (12277322-12277787)
               

               
               58-528, gnl|Hg17|chr4 (141134682-141134222)
               

               
               58-528, gnl|Mm7|chr3 (51953063-51952667)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-528, gnl|bosTau2|chr17 (12277322-12277787)
               

               
               58-528, gnl|Hg17|chr4 (141134682-141134222)
               

               
               58-528, gnl|Mm7|chr3 (51953063-51952667)

	58-528, gnl\|bosTau2\|chr17 (12277322-12277787)
	58-528, gnl\|Hg17\|chr4 (141134682-141134222)
	58-528, gnl\|Mm7\|chr3 (51953063-51952667)