Non-Coding RNA Search

Utr2-C0001801_O16

Sequence:


               
               TACCATGCACATCATCCACCCGGCAGTTTGACCTGTGGAATTGGCAGTGAGACCAAGTTC
TTAGAGGCCTGGCAGGTTTCTATTTTATAACCGATCTGTATACACCCCTTGCCCTTGATA
GGCAGAGGCTGGCCCAGTGTGGCCCAGTAGCCAGGCAAGCTGAAGGCTTAAAAGAGGAAG
CATCAGAATGAGATTGGTTTTCAGCTAATATCTTATTAAGGAAGTTGAGTCATTCTACTT
CTGCTATTTGTCCCCTCTGGGCATTCAGAGAAGGACAAGTTTTTACTTCCAGATGCAGTA
TCATGAGAGGGATTTGCCCTGGTCTGCCCTGGCTCTTAAGTGATCATTTTCATCATGGCC
CTATATTTCTCTTTTATGCACAGCAAACCAAGGCTCAGAGCGTTGGATGCTTACATAAAG
GCTCACCATACCTTGGCTGTATGGTACTAAAATAGAGAGAAGTCCCATTGTCTCAGTGAT
GGCGTTTTATGAGCTTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACCATGCACATCATCCACCCGGCAGTTTGACCTGTGGAATTGGCAGTGAGACCAAGTTC
TTAGAGGCCTGGCAGGTTTCTATTTTATAACCGATCTGTATACACCCCTTGCCCTTGATA
GGCAGAGGCTGGCCCAGTGTGGCCCAGTAGCCAGGCAAGCTGAAGGCTTAAAAGAGGAAG
CATCAGAATGAGATTGGTTTTCAGCTAATATCTTATTAAGGAAGTTGAGTCATTCTACTT
CTGCTATTTGTCCCCTCTGGGCATTCAGAGAAGGACAAGTTTTTACTTCCAGATGCAGTA
TCATGAGAGGGATTTGCCCTGGTCTGCCCTGGCTCTTAAGTGATCATTTTCATCATGGCC
CTATATTTCTCTTTTATGCACAGCAAACCAAGGCTCAGAGCGTTGGATGCTTACATAAAG
GCTCACCATACCTTGGCTGTATGGTACTAAAATAGAGAGAAGTCCCATTGTCTCAGTGAT
GGCGTTTTATGAGCTTGAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               102-315, + strand, RNAz p=0.902269

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               102-315, + strand, RNAz p=0.902269

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               102-497, gnl|bosTau2|chr19 (37081194-37081584)
               

               
               102-497, gnl|Hg17|chr17 (40729417-40728998)
               

               
               102-497, gnl|Mm7|chr11 (103358845-103358477)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               102-497, gnl|bosTau2|chr19 (37081194-37081584)
               

               
               102-497, gnl|Hg17|chr17 (40729417-40728998)
               

               
               102-497, gnl|Mm7|chr11 (103358845-103358477)

	102-497, gnl\|bosTau2\|chr19 (37081194-37081584)
	102-497, gnl\|Hg17\|chr17 (40729417-40728998)
	102-497, gnl\|Mm7\|chr11 (103358845-103358477)