Non-Coding RNA Search

Utr2-C0001802_F24

Sequence:


               
               CTGCTGCAGAAGATGCTGCGGAAGCTCAAGGAGCAAGGACACAGAGTGCTCATCTTCTCG
CAGATGACCAAAATGTTAGACTTGCTAGAGGACTTCCTCGACTACGAAGGCTACAAGTAT
GAGCGCATCGATGGTGGCATCACTGGCGCCCTGAGGCAGGAGGCCATCGACCGCTTTAAT
GCTCCTGGGGCCCAGCAATTCTGCTTCCTCCTGTCTACCCGAGCTGGAGGCCTGGGCATC
AATCTCGCCACAGCAGACACTGTCATCATCTTTGATTCTGACTGGAACCCCCATAATGAC
ATCCAGGCCTTCAGCCGTGCTCATCGGATCGGCCAGGCCAACAAAGTGATGATTTACCGA
TTTGTGACTCGCGCATCAGTGGAAGAGCGGATCACACAGGTGGCCAAGCGAAAGATGATG
CTGACACACCTGGTGGTGCGGCCCGGGCTGGGCTCCAAGGCAGGCTCCATGTCCAAGCAG
GAGCTGGACGACATCCTCAAATTTGGCACTGAGGAGCTATTTAAGGATGAAAATGAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCTGCAGAAGATGCTGCGGAAGCTCAAGGAGCAAGGACACAGAGTGCTCATCTTCTCG
CAGATGACCAAAATGTTAGACTTGCTAGAGGACTTCCTCGACTACGAAGGCTACAAGTAT
GAGCGCATCGATGGTGGCATCACTGGCGCCCTGAGGCAGGAGGCCATCGACCGCTTTAAT
GCTCCTGGGGCCCAGCAATTCTGCTTCCTCCTGTCTACCCGAGCTGGAGGCCTGGGCATC
AATCTCGCCACAGCAGACACTGTCATCATCTTTGATTCTGACTGGAACCCCCATAATGAC
ATCCAGGCCTTCAGCCGTGCTCATCGGATCGGCCAGGCCAACAAAGTGATGATTTACCGA
TTTGTGACTCGCGCATCAGTGGAAGAGCGGATCACACAGGTGGCCAAGCGAAAGATGATG
CTGACACACCTGGTGGTGCGGCCCGGGCTGGGCTCCAAGGCAGGCTCCATGTCCAAGCAG
GAGCTGGACGACATCCTCAAATTTGGCACTGAGGAGCTATTTAAGGATGAAAATGAGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               381-530, + strand, RNAz p=0.684898

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               381-530, + strand, RNAz p=0.684898

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               302-530, gnl|bosTau2|chr5 (60596630-60596858)
               

               
               302-530, gnl|Hg17|chr12 (6567381-6567153)
               

               
               302-530, gnl|Mm7|chr6 (125139519-125139747)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               302-530, gnl|bosTau2|chr5 (60596630-60596858)
               

               
               302-530, gnl|Hg17|chr12 (6567381-6567153)
               

               
               302-530, gnl|Mm7|chr6 (125139519-125139747)

	302-530, gnl\|bosTau2\|chr5 (60596630-60596858)
	302-530, gnl\|Hg17\|chr12 (6567381-6567153)
	302-530, gnl\|Mm7\|chr6 (125139519-125139747)