Non-Coding RNA Search

Utr2-C0001804_C01

Sequence:


               
               CAGGCACCGGTCCCCTCTGCTGTCCCGGGGCTGAGCCGCGCCCGGGTGTCCAGGACGGTG
TGTGCTCGAGTGTGTGTGTCCGCGCGGGCGAGCTCTGCACCGGCCCCGAGCCTCCCGCTC
GCTTCCTCCGGCCGCGGTGCATGTTCGCCTCCTGCCACTGTGTGCCGAGAGGGAGGAGGA
CCATGAAAATGATCCACTTTCGGAGCTCCAGCATCAAATCGCTTAGCCAGGAGATGAAAT
GCACCATCCGACTGCTGGACGACTCGGAGATCTCCTGCCACATCCAGAGGGAGACCAAAG
GGCAGTTTCTTATTGACCACATCTGCAACTACTACAGCTTGCTGGAGAAGGACTACTTTG
GCATTCGTTATGTGGACCCAGAGAAGCAGCGGCTCATCCACCATACACCATGTGCTTTAG
AGTGAAATTCTACAGACACGAACCCTTGAAGATTAAAGAAGAGCTCACCAGGTACCTTCT
GTACCCTGCAGATTAAAGGGATATTTTCCATGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGCACCGGTCCCCTCTGCTGTCCCGGGGCTGAGCCGCGCCCGGGTGTCCAGGACGGTG
TGTGCTCGAGTGTGTGTGTCCGCGCGGGCGAGCTCTGCACCGGCCCCGAGCCTCCCGCTC
GCTTCCTCCGGCCGCGGTGCATGTTCGCCTCCTGCCACTGTGTGCCGAGAGGGAGGAGGA
CCATGAAAATGATCCACTTTCGGAGCTCCAGCATCAAATCGCTTAGCCAGGAGATGAAAT
GCACCATCCGACTGCTGGACGACTCGGAGATCTCCTGCCACATCCAGAGGGAGACCAAAG
GGCAGTTTCTTATTGACCACATCTGCAACTACTACAGCTTGCTGGAGAAGGACTACTTTG
GCATTCGTTATGTGGACCCAGAGAAGCAGCGGCTCATCCACCATACACCATGTGCTTTAG
AGTGAAATTCTACAGACACGAACCCTTGAAGATTAAAGAAGAGCTCACCAGGTACCTTCT
GTACCCTGCAGATTAAAGGGATATTTTCCATGGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               169-287, - strand, RNAz p=0.942212

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               169-287, - strand, RNAz p=0.942212

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-287, gnl|bosTau2|chr8 (41752627-41752903)
               

               
               1-287, gnl|Hg17|chr9 (83382838-83382554)
               

               
               1-287, gnl|Mm7|chr4 (73417354-73417640)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-287, gnl|bosTau2|chr8 (41752627-41752903)
               

               
               1-287, gnl|Hg17|chr9 (83382838-83382554)
               

               
               1-287, gnl|Mm7|chr4 (73417354-73417640)

	1-287, gnl\|bosTau2\|chr8 (41752627-41752903)
	1-287, gnl\|Hg17\|chr9 (83382838-83382554)
	1-287, gnl\|Mm7\|chr4 (73417354-73417640)