Non-Coding RNA Search

Utr2-C0001805_D13

Sequence:


               
               GATGAAGTCTGGGCTAGGTACACCCCTCTCCCCTGCTTGCAGGCTGTGCTAAGTCTTAAC
CTTGTTCTCTTACACCGCTGGGTCCTTCCTCCACATTGGATCCACTGTCTCCCTGGTGTG
GTCTCCTCTTCTCTGTGTCTCAATTCAACTTTTAGGCACTTGACTTCCTGGTATTACCAA
AAATCCCACTACTCTCTTTTAGAAGGTTACCAATTCCATTCAGTGCTTCAATATTACTCA
GGGAATTTTGATATACAGTCTCTCATCCTCACAACCTCATAGGTAACACAATCCAGGCTA
CCATATTTTAACATGATTAGCCCAGAATTTAATAAGCATGGCCCCAAGCTAAATTGAAGT
CTTCTGATTTCTGAGTCTTTTCACACCAACAACTGCCAGAGATCTAAGAGAATATTCTAC
ATCACAAAGCCCCAAGTATTTTTGAGGCATTTATGGAACACTTTTCCTTTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGAAGTCTGGGCTAGGTACACCCCTCTCCCCTGCTTGCAGGCTGTGCTAAGTCTTAAC
CTTGTTCTCTTACACCGCTGGGTCCTTCCTCCACATTGGATCCACTGTCTCCCTGGTGTG
GTCTCCTCTTCTCTGTGTCTCAATTCAACTTTTAGGCACTTGACTTCCTGGTATTACCAA
AAATCCCACTACTCTCTTTTAGAAGGTTACCAATTCCATTCAGTGCTTCAATATTACTCA
GGGAATTTTGATATACAGTCTCTCATCCTCACAACCTCATAGGTAACACAATCCAGGCTA
CCATATTTTAACATGATTAGCCCAGAATTTAATAAGCATGGCCCCAAGCTAAATTGAAGT
CTTCTGATTTCTGAGTCTTTTCACACCAACAACTGCCAGAGATCTAAGAGAATATTCTAC
ATCACAAAGCCCCAAGTATTTTTGAGGCATTTATGGAACACTTTTCCTTTTCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               138-253, + strand, RNAz p=0.982701

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               138-253, + strand, RNAz p=0.982701

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-473, gnl|bosTau2|chr15 (23346720-23346258)
               

               
               1-473, gnl|Hg17|chr11 (13360598-13361084)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-473, gnl|bosTau2|chr15 (23346720-23346258)
               

               
               1-473, gnl|Hg17|chr11 (13360598-13361084)

	1-473, gnl\|bosTau2\|chr15 (23346720-23346258)
	1-473, gnl\|Hg17\|chr11 (13360598-13361084)