Utr2-C0001805_N22
|
GCTCCCGCCAGAGCTCCCGCAACTTCTGGAGGCAGCAGAAGCCCATCTACGCCCGGGAGC
GGGACCGGAAGCTGATGCAAGAGAAGTGGCTGCGGGACCGCAAACGCCGCCCCTCGCAGA
CAGCCCACTACATCCTCAAGAGCCTGGAGGACATTGACATGTTGCTAACCAGTGGCAGTG
CTGAAGGCAGCCTTCAGAAAGCTGAGAAAGTGCTGAAGAAGGTTCTGGAATGGAGCAAAG
AGGAGGTGCCCAACAAGGATGAACTGTTGGGAAACTTGTACAGCTGCATAGGGAACGCCC
AAATGGAGCTGGGGCAGATGGTGGCAGCCCTGCAGAGCCACAGGAAGGACCTGGAGATCG
CCAAGGAATACGATCTTCCTGAAGCCAAGTCCAGAGCCCTGGATAACATTGGCAGGGTTT
TTGCCAGAGTTGGGAAATTCCAGCAAGCCATTGACACGTGGGAGGAAAAGATCCCTCTGG
CCAGAACCACCCTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTCCCGCCAGAGCTCCCGCAACTTCTGGAGGCAGCAGAAGCCCATCTACGCCCGGGAGC
GGGACCGGAAGCTGATGCAAGAGAAGTGGCTGCGGGACCGCAAACGCCGCCCCTCGCAGA
CAGCCCACTACATCCTCAAGAGCCTGGAGGACATTGACATGTTGCTAACCAGTGGCAGTG
CTGAAGGCAGCCTTCAGAAAGCTGAGAAAGTGCTGAAGAAGGTTCTGGAATGGAGCAAAG
AGGAGGTGCCCAACAAGGATGAACTGTTGGGAAACTTGTACAGCTGCATAGGGAACGCCC
AAATGGAGCTGGGGCAGATGGTGGCAGCCCTGCAGAGCCACAGGAAGGACCTGGAGATCG
CCAAGGAATACGATCTTCCTGAAGCCAAGTCCAGAGCCCTGGATAACATTGGCAGGGTTT
TTGCCAGAGTTGGGAAATTCCAGCAAGCCATTGACACGTGGGAGGAAAAGATCCCTCTGG
CCAGAACCACCCTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
24-162, gnl|bosTau2|chr23 (45784-45646) |
|
24-162, gnl|Hg17|chr17 (37348422-37348560) |
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24-162, gnl|Mm7|chr11 (100662615-100662753) |
| |
|
163-370, gnl|bosTau2|chr23 (45463-45256) |
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163-370, gnl|canFam2|chr9 (24232067-24231839) |
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163-370, gnl|dasNov1|scaffold_2391 (1609-1381) |
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163-370, gnl|echTel1|scaffold_160697 (251-24) |
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163-370, gnl|fr1|chrUn (96680636-96680408) |
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163-370, gnl|galGal2|chr27_random (436131-435903) |
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163-370, gnl|hg17|chr17 (37348732-37348960) |
|
163-370, gnl|Hg17|chr17 (37348744-37348951) |
|
163-370, gnl|mm7|chr11 (100662891-100663119) |
|
163-370, gnl|Mm7|chr11 (100662903-100663110) |
|
163-370, gnl|monDom2|scaffold_18 (52222715-52222944) |
|
163-370, gnl|oryCun1|scaffold_203960 (22538-22310) |
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163-370, gnl|panTro1|chr19 (40549792-40550020) |
|
163-370, gnl|rheMac2|chr16 (52040116-52040344) |
|
163-370, gnl|rn3|chr10 (89511541-89511769) |
|
163-370, gnl|tetNig1|chrUn_random (135912380-135912612) |
|
163-370, gnl|xenTro1|scaffold_394 (852086-852311) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
24-162, gnl|bosTau2|chr23 (45784-45646) |
|
24-162, gnl|Hg17|chr17 (37348422-37348560) |
|
24-162, gnl|Mm7|chr11 (100662615-100662753) |
| |
|
163-370, gnl|bosTau2|chr23 (45463-45256) |
|
163-370, gnl|canFam2|chr9 (24232067-24231839) |
|
163-370, gnl|dasNov1|scaffold_2391 (1609-1381) |
|
163-370, gnl|echTel1|scaffold_160697 (251-24) |
|
163-370, gnl|fr1|chrUn (96680636-96680408) |
|
163-370, gnl|galGal2|chr27_random (436131-435903) |
|
163-370, gnl|hg17|chr17 (37348732-37348960) |
|
163-370, gnl|Hg17|chr17 (37348744-37348951) |
|
163-370, gnl|mm7|chr11 (100662891-100663119) |
|
163-370, gnl|Mm7|chr11 (100662903-100663110) |
|
163-370, gnl|monDom2|scaffold_18 (52222715-52222944) |
|
163-370, gnl|oryCun1|scaffold_203960 (22538-22310) |
|
163-370, gnl|panTro1|chr19 (40549792-40550020) |
|
163-370, gnl|rheMac2|chr16 (52040116-52040344) |
|
163-370, gnl|rn3|chr10 (89511541-89511769) |
|
163-370, gnl|tetNig1|chrUn_random (135912380-135912612) |
|
163-370, gnl|xenTro1|scaffold_394 (852086-852311) |
