Non-Coding RNA Search

Utr2-C0001805_O21

Sequence:


               
               CCACTCGGCACTGCTCCAGGGAGAGAGGGCATTACCAGAGCATACAAACCAGCAGCAGCG
GCAGCCGGGGATTCATGGAGGGCCTGCCCCGGCGGTGTTCCCTGATGAGCCAGAAACCAA
CACAGGCCAGTCCCCTGGGGGTGTGCTGTGAGGATGCAGACCTAGGACTGTGCTGAGGAG
GTTGGGGTGCGGTTCTCAGACATGTGCTCCCGGACATCCGCCCCAGGCCGGCGAAGCTGG
AGGGACCGCGGGGTCTCGAGTAACGCTGTTTCCCCCGCTCCCGCCAGTCCAAGGTGATCG
TCGCCCAGATAGAGGTTCTGCAGGAGCTGTACGAGGCCAGTCAGACCGAGCAGGAGCGGC
TGCACAAGGAGCAGGAGCGGCTGCTGGAGGAGCGGAAGAGGCTGCAGGCCGACTTGCAGC
TCTGCCTGGAAGAAATGCAGCTGCTCCAAGCCCAGTCCCCTTCTCTAAAAATGAGCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACTCGGCACTGCTCCAGGGAGAGAGGGCATTACCAGAGCATACAAACCAGCAGCAGCG
GCAGCCGGGGATTCATGGAGGGCCTGCCCCGGCGGTGTTCCCTGATGAGCCAGAAACCAA
CACAGGCCAGTCCCCTGGGGGTGTGCTGTGAGGATGCAGACCTAGGACTGTGCTGAGGAG
GTTGGGGTGCGGTTCTCAGACATGTGCTCCCGGACATCCGCCCCAGGCCGGCGAAGCTGG
AGGGACCGCGGGGTCTCGAGTAACGCTGTTTCCCCCGCTCCCGCCAGTCCAAGGTGATCG
TCGCCCAGATAGAGGTTCTGCAGGAGCTGTACGAGGCCAGTCAGACCGAGCAGGAGCGGC
TGCACAAGGAGCAGGAGCGGCTGCTGGAGGAGCGGAAGAGGCTGCAGGCCGACTTGCAGC
TCTGCCTGGAAGAAATGCAGCTGCTCCAAGCCCAGTCCCCTTCTCTAAAAATGAGCCTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               305-478, + strand, RNAz p=0.980678

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               305-478, + strand, RNAz p=0.980678

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-478, gnl|bosTau2|chr4 (50525213-50524730)
               

               
               1-478, gnl|Hg17|chr7 (128045514-128045998)
               

               
               1-478, gnl|Mm7|chr6 (29348924-29349408)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chr4 (50525213-50524730)
               

               
               1-478, gnl|Hg17|chr7 (128045514-128045998)
               

               
               1-478, gnl|Mm7|chr6 (29348924-29349408)

	1-478, gnl\|bosTau2\|chr4 (50525213-50524730)
	1-478, gnl\|Hg17\|chr7 (128045514-128045998)
	1-478, gnl\|Mm7\|chr6 (29348924-29349408)