Non-Coding RNA Search

Utr2-C0001808_O18

Sequence:


               
               GACTTGATCAGGTACGTCCTTGCCAGCCCATCGGTTAGGGTATATTCTGACCACCCACCC
TCTCCTCCTGGGGGGGCTGATCAGACCCCTGAAGAGGACCGAACCAGCCCTGCTGGGCTT
GAAATGAAGGTCACGCCGTTACTTCTTCCTCACAGAAATTCAAGTAAGGATCTGTGTTCT
GCTCTCCATCTGTTTTCTGATCTCATGTGAGAGAGGTGAGAAGATCAAGGAGAAGATAAA
GATTTAAGAGCTCTGCCTTTAGGATTCAGAATCTGATCACTCAGTCCTCTGGACTGTGCT
GCTCACCTTGGAATACTAATCATTCTTTTATGTGTGTGATTTTTTTTTTTTTTTTTTGct
tttgtagggccacacccgggacatatagaggttcccaggctaggggtcgaatcggagctg
tagccgccagcctacaccgcagccacaacagatccaagcctcgtctgtgacctacaccac
agctcac

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACTTGATCAGGTACGTCCTTGCCAGCCCATCGGTTAGGGTATATTCTGACCACCCACCC
TCTCCTCCTGGGGGGGCTGATCAGACCCCTGAAGAGGACCGAACCAGCCCTGCTGGGCTT
GAAATGAAGGTCACGCCGTTACTTCTTCCTCACAGAAATTCAAGTAAGGATCTGTGTTCT
GCTCTCCATCTGTTTTCTGATCTCATGTGAGAGAGGTGAGAAGATCAAGGAGAAGATAAA
GATTTAAGAGCTCTGCCTTTAGGATTCAGAATCTGATCACTCAGTCCTCTGGACTGTGCT
GCTCACCTTGGAATACTAATCATTCTTTTATGTGTGTGATTTTTTTTTTTTTTTTTTGct
tttgtagggccacacccgggacatatagaggttcccaggctaggggtcgaatcggagctg
tagccgccagcctacaccgcagccacaacagatccaagcctcgtctgtgacctacaccac
agctcac

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               77-187, - strand, RNAz p=0.671615

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               77-187, - strand, RNAz p=0.671615

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-348, gnl|bosTau2|chr20 (24234688-24234361)
               

               
               1-348, gnl|Hg17|chr5 (36707082-36707383)
               

               
               1-348, gnl|Mm7|chr15 (8480348-8480030)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-348, gnl|bosTau2|chr20 (24234688-24234361)
               

               
               1-348, gnl|Hg17|chr5 (36707082-36707383)
               

               
               1-348, gnl|Mm7|chr15 (8480348-8480030)

	1-348, gnl\|bosTau2\|chr20 (24234688-24234361)
	1-348, gnl\|Hg17\|chr5 (36707082-36707383)
	1-348, gnl\|Mm7\|chr15 (8480348-8480030)