Non-Coding RNA Search

Utr2-C0001809_E03

Sequence:


               
               TCTCAATGAACAAAAAAACTCTCAAATCCTCCCCTCCCCACAAAACCCCAGCCAGAAGGG
GGACCCCTTCCCTCCTAATTCCATACTGTTTGATTTATAGTTGCTTTGGGCTCTTTAAAG
TCAAGAATCAGGTCTTCCCTGATTCCCTGCATTCCTGCCTCCCTCAGCAGACCACGCACC
TAGTACTGAGCGGGCAGTTGGTATCTGAAAGACGATCTGGTACAAAGGGGACTAGTAACC
AGGCTTACATGTAACAGATGTCTGGGTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCAATGAACAAAAAAACTCTCAAATCCTCCCCTCCCCACAAAACCCCAGCCAGAAGGG
GGACCCCTTCCCTCCTAATTCCATACTGTTTGATTTATAGTTGCTTTGGGCTCTTTAAAG
TCAAGAATCAGGTCTTCCCTGATTCCCTGCATTCCTGCCTCCCTCAGCAGACCACGCACC
TAGTACTGAGCGGGCAGTTGGTATCTGAAAGACGATCTGGTACAAAGGGGACTAGTAACC
AGGCTTACATGTAACAGATGTCTGGGTCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               43-161, - strand, RNAz p=0.591738

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               43-161, - strand, RNAz p=0.591738

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

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               3-210, gnl|bosTau2|chr10 (11897794-11897598)
               

               
               3-210, gnl|canFam2|chr8 (7413683-7413861)
               

               
               3-210, gnl|hg17|chr14 (23973858-23974029)
               

               
               3-210, gnl|Hg17|chr14 (23974054-23973857)
               

               
               3-210, gnl|loxAfr1|scaffold_139073 (4633-4801)
               

               
               3-210, gnl|mm7|chr14 (50758781-50758927)
               

               
               3-210, gnl|Mm7|chr14 (50758942-50758780)
               

               
               3-210, gnl|oryCun1|scaffold_179870 (3191-3326)
               

               
               3-210, gnl|panTro1|chr15 (22878951-22879122)
               

               
               3-210, gnl|rheMac2|chr7 (87332878-87333035)
               

               
               3-210, gnl|rn3|chr15 (34052318-34052460)

Aligned organism(s): 11 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-210, gnl|bosTau2|chr10 (11897794-11897598)
               

               
               3-210, gnl|canFam2|chr8 (7413683-7413861)
               

               
               3-210, gnl|hg17|chr14 (23973858-23974029)
               

               
               3-210, gnl|Hg17|chr14 (23974054-23973857)
               

               
               3-210, gnl|loxAfr1|scaffold_139073 (4633-4801)
               

               
               3-210, gnl|mm7|chr14 (50758781-50758927)
               

               
               3-210, gnl|Mm7|chr14 (50758942-50758780)
               

               
               3-210, gnl|oryCun1|scaffold_179870 (3191-3326)
               

               
               3-210, gnl|panTro1|chr15 (22878951-22879122)
               

               
               3-210, gnl|rheMac2|chr7 (87332878-87333035)
               

               
               3-210, gnl|rn3|chr15 (34052318-34052460)

	3-210, gnl\|bosTau2\|chr10 (11897794-11897598)
	3-210, gnl\|canFam2\|chr8 (7413683-7413861)
	3-210, gnl\|hg17\|chr14 (23973858-23974029)
	3-210, gnl\|Hg17\|chr14 (23974054-23973857)
	3-210, gnl\|loxAfr1\|scaffold_139073 (4633-4801)
	3-210, gnl\|mm7\|chr14 (50758781-50758927)
	3-210, gnl\|Mm7\|chr14 (50758942-50758780)
	3-210, gnl\|oryCun1\|scaffold_179870 (3191-3326)
	3-210, gnl\|panTro1\|chr15 (22878951-22879122)
	3-210, gnl\|rheMac2\|chr7 (87332878-87333035)
	3-210, gnl\|rn3\|chr15 (34052318-34052460)