Non-Coding RNA Search

Utr2-C0001811_K08

Sequence:


               
               GCCGAGAGGCTGGAGAAGCCTTGCAAGATTCTAACACGGTGCCATTTAAAGAACTTATTT
CGAATAGTAAAAGAAATAATCTTTGGATATTGGATGAGAATTTATGTATATATATGTTGT
CTTCATGATGTTTAGAAATGTTAATAATTAATGAAACAATTTTTAAATAAAAATTTTAAA
AATATCTAATCATTTTTACCTGTATAGGATTGGACCGGAACAAATTAATAAATTTGGCCT
ATTTACTTGGAAGTGATTATACAGAAGGAATACCAACTGTAGGTTGTGTTACAGCCATGG
AAATTCTCAACGAATTCCCTGGACATGGCCTGGGACCTCTCCTAAAATTCTCGGAAGTTC
TTTGTTAATTTCTTCAATTCAGATGTTTATATATATAAATACCCATATTATAACGTTATT
TATGTCCCAGTCCATTTGTATCCTGGATTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGAGAGGCTGGAGAAGCCTTGCAAGATTCTAACACGGTGCCATTTAAAGAACTTATTT
CGAATAGTAAAAGAAATAATCTTTGGATATTGGATGAGAATTTATGTATATATATGTTGT
CTTCATGATGTTTAGAAATGTTAATAATTAATGAAACAATTTTTAAATAAAAATTTTAAA
AATATCTAATCATTTTTACCTGTATAGGATTGGACCGGAACAAATTAATAAATTTGGCCT
ATTTACTTGGAAGTGATTATACAGAAGGAATACCAACTGTAGGTTGTGTTACAGCCATGG
AAATTCTCAACGAATTCCCTGGACATGGCCTGGGACCTCTCCTAAAATTCTCGGAAGTTC
TTTGTTAATTTCTTCAATTCAGATGTTTATATATATAAATACCCATATTATAACGTTATT
TATGTCCCAGTCCATTTGTATCCTGGATTGTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               293-410, - strand, RNAz p=0.603128

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               293-410, - strand, RNAz p=0.603128

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-410, gnl|bosTau2|chr12 (42379510-42379919)
               

               
               6-410, gnl|Hg17|chr13 (102318272-102318662)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-410, gnl|bosTau2|chr12 (42379510-42379919)
               

               
               6-410, gnl|Hg17|chr13 (102318272-102318662)

	6-410, gnl\|bosTau2\|chr12 (42379510-42379919)
	6-410, gnl\|Hg17\|chr13 (102318272-102318662)