Non-Coding RNA Search

Utr2-C0001812_K02

Sequence:


               
               GCGGGAGCTCTGAAAAAGAAAAGGGGGGAAAAAAAGTAATAGGAACCTGCAAAGAACTGG
CTGAATAGCAGCAGGAACTTTTATGAAGGTCCCTCCTCTCTGAAATAATCCAGAATATCT
GCACACCAGGATGTGGGGCCACTGGATCTCGTCTCTACCCTCAGCCCCCAAACTTGCAAA
CAGACCCCATGACAGCCTGGAGGTCACTCAGCCCAGTCACAGCTGGGCACTCTGAGCTGG
CAGCTCCATGGCCCACTCTTAACTCGTCTCTTCCCAAGCCCTTAAGCTGTTCCTTAAAGA
GGCTTTGGCTCCAAGAGAGGGTCTGGCTGGGGTCCCAGAGCTGGTCAGAGTCCTTTTCCT
TCAAAGGCCCTACTGGGCAGCAGAGGAGCCCCTGCTGGGCTGGACAGAGCTTCTGTCCAG
GACTGAGGATCAGTCAGTCAGGCTGGCGCCCTAGCTGGTTTGCAGATGACATGCAGGCCT
TGGGGACTCCAAACTTGGCTGTCTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGGAGCTCTGAAAAAGAAAAGGGGGGAAAAAAAGTAATAGGAACCTGCAAAGAACTGG
CTGAATAGCAGCAGGAACTTTTATGAAGGTCCCTCCTCTCTGAAATAATCCAGAATATCT
GCACACCAGGATGTGGGGCCACTGGATCTCGTCTCTACCCTCAGCCCCCAAACTTGCAAA
CAGACCCCATGACAGCCTGGAGGTCACTCAGCCCAGTCACAGCTGGGCACTCTGAGCTGG
CAGCTCCATGGCCCACTCTTAACTCGTCTCTTCCCAAGCCCTTAAGCTGTTCCTTAAAGA
GGCTTTGGCTCCAAGAGAGGGTCTGGCTGGGGTCCCAGAGCTGGTCAGAGTCCTTTTCCT
TCAAAGGCCCTACTGGGCAGCAGAGGAGCCCCTGCTGGGCTGGACAGAGCTTCTGTCCAG
GACTGAGGATCAGTCAGTCAGGCTGGCGCCCTAGCTGGTTTGCAGATGACATGCAGGCCT
TGGGGACTCCAAACTTGGCTGTCTCAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               301-455, + strand, RNAz p=0.996231

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               301-455, + strand, RNAz p=0.996231

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               254-345, + strand, RNAmicro p=0.947365

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               254-345, + strand, RNAmicro p=0.947365

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               70-507, gnl|bosTau2|chr3 (27431613-27432044)
               

               
               70-507, gnl|Hg17|chr1 (112982208-112982643)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               70-507, gnl|bosTau2|chr3 (27431613-27432044)
               

               
               70-507, gnl|Hg17|chr1 (112982208-112982643)

	70-507, gnl\|bosTau2\|chr3 (27431613-27432044)
	70-507, gnl\|Hg17\|chr1 (112982208-112982643)