Non-Coding RNA Search

Utr2-C0001812_K15

Sequence:


               
               TTTAGCCATAATCAGCTGAGCTGTTCAGTTCAATTCTTGAAATAATTCACTGAGTGCTTG
CTAATAATATTGCTAGGTTATATTTGTTGAGTACTTACAATGTGTGATCACTGTCCCTAA
TGCTTTATACATATAGATTGATTTTATCCCCACCACAGCTCTATGGGGCAGGTACCATTA
TCTTCCATTTTACAGGTTGAGGAAACTGAGGCATAGAGCAGAAGAGTCTATTTTCCCAAG
GTCCTAAGTGAGGAAAGTCATGGGACAGGCTTCAGAACCCTAGCTCCTACCCATACATTG
TACTCTGTGTAAGCTTGAGCGCCCTTGCTAAGAACTATGGGAGGGGCAAGAAAGATCAAA
ATGCAGTCCTTGCTggaattcccgttgtggctcagcaggttaagaacccgattactacac
atgaggatgagggttcaatccctggcctcgTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAGCCATAATCAGCTGAGCTGTTCAGTTCAATTCTTGAAATAATTCACTGAGTGCTTG
CTAATAATATTGCTAGGTTATATTTGTTGAGTACTTACAATGTGTGATCACTGTCCCTAA
TGCTTTATACATATAGATTGATTTTATCCCCACCACAGCTCTATGGGGCAGGTACCATTA
TCTTCCATTTTACAGGTTGAGGAAACTGAGGCATAGAGCAGAAGAGTCTATTTTCCCAAG
GTCCTAAGTGAGGAAAGTCATGGGACAGGCTTCAGAACCCTAGCTCCTACCCATACATTG
TACTCTGTGTAAGCTTGAGCGCCCTTGCTAAGAACTATGGGAGGGGCAAGAAAGATCAAA
ATGCAGTCCTTGCTggaattcccgttgtggctcagcaggttaagaacccgattactacac
atgaggatgagggttcaatccctggcctcgTTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               193-286, + strand, RNAz p=0.920998

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               193-286, + strand, RNAz p=0.920998

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-314, gnl|bosTau2|chr11 (48473137-48472818)
               

               
               3-314, gnl|Hg17|chr2 (69958199-69958530)
               

               
               3-314, gnl|Mm7|chr6 (86818141-86817865)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-314, gnl|bosTau2|chr11 (48473137-48472818)
               

               
               3-314, gnl|Hg17|chr2 (69958199-69958530)
               

               
               3-314, gnl|Mm7|chr6 (86818141-86817865)

	3-314, gnl\|bosTau2\|chr11 (48473137-48472818)
	3-314, gnl\|Hg17\|chr2 (69958199-69958530)
	3-314, gnl\|Mm7\|chr6 (86818141-86817865)