Non-Coding RNA Search

Utr2-C0001814_M08

Sequence:


               
               TTTCCTTTTTCTTATTTAGTGTGATTAATCATTAGTGCTTCATGAGAAGCCTTCTTTCTG
TTAGAAAATGTGACAACTAGAATACAAGTTAAACCATTCCATTCAGGGCCCTACAGTGAG
TCATGTAAGCTCCCTTTTAAAATGAGAGAAAGTTGAGCATGCTTGCAGACTATAAGGCAT
GTCTTTGTACGTGTGGAAGAGAAATGATAACCTATTGCTCTTAGAATACGGGTGGAGGCC
TATCCTTAGATGAAAGGAGTTACCTCTTCACTGAGGTATAGTGATGATAAGAATAGGAGT
TGGGAAGAGTACCCTGATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCCTTTTTCTTATTTAGTGTGATTAATCATTAGTGCTTCATGAGAAGCCTTCTTTCTG
TTAGAAAATGTGACAACTAGAATACAAGTTAAACCATTCCATTCAGGGCCCTACAGTGAG
TCATGTAAGCTCCCTTTTAAAATGAGAGAAAGTTGAGCATGCTTGCAGACTATAAGGCAT
GTCTTTGTACGTGTGGAAGAGAAATGATAACCTATTGCTCTTAGAATACGGGTGGAGGCC
TATCCTTAGATGAAAGGAGTTACCTCTTCACTGAGGTATAGTGATGATAAGAATAGGAGT
TGGGAAGAGTACCCTGATAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               230-320, - strand, RNAz p=0.932745

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               230-320, - strand, RNAz p=0.932745

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               1-320, gnl|bosTau2|chr24 (6040774-6041091)
               

               
               1-320, gnl|canFam2|chrX (60603143-60603721)
               

               
               1-320, gnl|dasNov1|scaffold_8868 (13651-14244)
               

               
               1-320, gnl|echTel1|scaffold_67207 (5257-4448)
               

               
               1-320, gnl|hg17|chrX (73219972-73220564)
               

               
               1-320, gnl|Hg17|chrX (73220636-73220262)
               

               
               1-320, gnl|loxAfr1|scaffold_29368 (8627-8031)
               

               
               1-320, gnl|rheMac2|chrX (73310573-73311169)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-320, gnl|bosTau2|chr24 (6040774-6041091)
               

               
               1-320, gnl|canFam2|chrX (60603143-60603721)
               

               
               1-320, gnl|dasNov1|scaffold_8868 (13651-14244)
               

               
               1-320, gnl|echTel1|scaffold_67207 (5257-4448)
               

               
               1-320, gnl|hg17|chrX (73219972-73220564)
               

               
               1-320, gnl|Hg17|chrX (73220636-73220262)
               

               
               1-320, gnl|loxAfr1|scaffold_29368 (8627-8031)
               

               
               1-320, gnl|rheMac2|chrX (73310573-73311169)

	1-320, gnl\|bosTau2\|chr24 (6040774-6041091)
	1-320, gnl\|canFam2\|chrX (60603143-60603721)
	1-320, gnl\|dasNov1\|scaffold_8868 (13651-14244)
	1-320, gnl\|echTel1\|scaffold_67207 (5257-4448)
	1-320, gnl\|hg17\|chrX (73219972-73220564)
	1-320, gnl\|Hg17\|chrX (73220636-73220262)
	1-320, gnl\|loxAfr1\|scaffold_29368 (8627-8031)
	1-320, gnl\|rheMac2\|chrX (73310573-73311169)