Non-Coding RNA Search

gvo-UMC-pgvo2-006-a01

Sequence:


               
               CGGGGGAACGGGACTTTTGCAACATCGACTTTCCAGACAGTACAGCTGACAGCAGCTGCA
GAAATCGACACCTATAACCCTCAGATATATGTGATCGAAGAAAACACTGTCATGATTCCC
ATTACAATAATGAAACCCCATGAGAAAGCTGAAGTACCAACTGGAGTTATAATAGGAAGT
GTAATTGCTGGAATCCTTTTGCTATTAGCTTTGGTTGCAGTTTTATGGAAGCTCGGATTC
TTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGGAACGGGACTTTTGCAACATCGACTTTCCAGACAGTACAGCTGACAGCAGCTGCA
GAAATCGACACCTATAACCCTCAGATATATGTGATCGAAGAAAACACTGTCATGATTCCC
ATTACAATAATGAAACCCCATGAGAAAGCTGAAGTACCAACTGGAGTTATAATAGGAAGT
GTAATTGCTGGAATCCTTTTGCTATTAGCTTTGGTTGCAGTTTTATGGAAGCTCGGATTC
TTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q6Q7J9_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6Q7J9_PIG

Aligned organism(s): 13 entry(ies)

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Aligned organism(s): 13 entry(ies)

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               104-231, gnl|bosTau2|chr20 (14530934-14531060)
               

               
               104-231, gnl|canFam2|chr4 (65373970-65373703)
               

               
               104-231, gnl|echTel1|scaffold_157658 (778-513)
               

               
               104-231, gnl|hg17|chr5 (52421412-52421682)
               

               
               104-231, gnl|Hg17|chr5 (52421523-52421649)
               

               
               104-231, gnl|loxAfr1|scaffold_8557 (5430-5154)
               

               
               104-231, gnl|mm7|chr13 (112009640-112009382)
               

               
               104-231, gnl|Mm7|chr13 (112009536-112009410)
               

               
               104-231, gnl|monDom2|scaffold_27 (15266215-15266443)
               

               
               104-231, gnl|oryCun1|scaffold_118699 (21414-21640)
               

               
               104-231, gnl|panTro1|chr4_random (34986181-34985911)
               

               
               104-231, gnl|rheMac2|chr6 (50724115-50724385)
               

               
               104-231, gnl|rn3|chr2 (46897157-46896896)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               104-231, gnl|bosTau2|chr20 (14530934-14531060)
               

               
               104-231, gnl|canFam2|chr4 (65373970-65373703)
               

               
               104-231, gnl|echTel1|scaffold_157658 (778-513)
               

               
               104-231, gnl|hg17|chr5 (52421412-52421682)
               

               
               104-231, gnl|Hg17|chr5 (52421523-52421649)
               

               
               104-231, gnl|loxAfr1|scaffold_8557 (5430-5154)
               

               
               104-231, gnl|mm7|chr13 (112009640-112009382)
               

               
               104-231, gnl|Mm7|chr13 (112009536-112009410)
               

               
               104-231, gnl|monDom2|scaffold_27 (15266215-15266443)
               

               
               104-231, gnl|oryCun1|scaffold_118699 (21414-21640)
               

               
               104-231, gnl|panTro1|chr4_random (34986181-34985911)
               

               
               104-231, gnl|rheMac2|chr6 (50724115-50724385)
               

               
               104-231, gnl|rn3|chr2 (46897157-46896896)

	104-231, gnl\|bosTau2\|chr20 (14530934-14531060)
	104-231, gnl\|canFam2\|chr4 (65373970-65373703)
	104-231, gnl\|echTel1\|scaffold_157658 (778-513)
	104-231, gnl\|hg17\|chr5 (52421412-52421682)
	104-231, gnl\|Hg17\|chr5 (52421523-52421649)
	104-231, gnl\|loxAfr1\|scaffold_8557 (5430-5154)
	104-231, gnl\|mm7\|chr13 (112009640-112009382)
	104-231, gnl\|Mm7\|chr13 (112009536-112009410)
	104-231, gnl\|monDom2\|scaffold_27 (15266215-15266443)
	104-231, gnl\|oryCun1\|scaffold_118699 (21414-21640)
	104-231, gnl\|panTro1\|chr4_random (34986181-34985911)
	104-231, gnl\|rheMac2\|chr6 (50724115-50724385)
	104-231, gnl\|rn3\|chr2 (46897157-46896896)