gvo-UMC-pgvo2-008-f01
|
TGCAGAACCGCATTGAAAAGGAACAGAAATTCTCCGTTATCCGAAATGGTCACATCATCC
AGCTCCCTGTGGCCGAGATCGTGGTGGGTGATATTGCCCAAATCAAATACGGTGACCTGC
TGCCCGCAGATGGGATCCTGATCCAGGGGAATGATCTCAAGATTGATGAGAGCTCTCTGA
CTGGTGAATCAGACCATGTCAAGAAATCCTTGGAAAGAGACCCCATGTTGCTCTCAGGGA
CCCATGTCATGGAAGGTTCTGGCCGAATGGTAGTGACTGCTGTGGGTATCAACTCTCAGA
CTGGAATCATCTTTACCCTCTTGGGGGCCAGTGAAGGGGAAGAAGGGGAGAAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TGCAGAACCGCATTGAAAAGGAACAGAAATTCTCCGTTATCCGAAATGGTCACATCATCC
AGCTCCCTGTGGCCGAGATCGTGGTGGGTGATATTGCCCAAATCAAATACGGTGACCTGC
TGCCCGCAGATGGGATCCTGATCCAGGGGAATGATCTCAAGATTGATGAGAGCTCTCTGA
CTGGTGAATCAGACCATGTCAAGAAATCCTTGGAAAGAGACCCCATGTTGCTCTCAGGGA
CCCATGTCATGGAAGGTTCTGGCCGAATGGTAGTGACTGCTGTGGGTATCAACTCTCAGA
CTGGAATCATCTTTACCCTCTTGGGGGCCAGTGAAGGGGAAGAAGGGGAGAAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
111-238, gnl|bosTau2|chr16 (2855272-2855399) |
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111-238, gnl|canFam2|chr38 (3381001-3381087) |
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111-238, gnl|danRer3|chr11 (21176348-21176434) |
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111-238, gnl|dasNov1|scaffold_137946 (3835-3921) |
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111-238, gnl|echTel1|scaffold_211572 (3873-3787) |
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111-238, gnl|fr1|chrUn (75935025-75934939) |
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111-238, gnl|galGal2|chr26 (3690017-3690103) |
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111-238, gnl|hg17|chr1 (200400986-200401072) |
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111-238, gnl|Hg17|chr1 (200400990-200401117) |
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111-238, gnl|loxAfr1|scaffold_3228 (66953-66867) |
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111-238, gnl|mm7|chr1 (133628455-133628369) |
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111-238, gnl|Mm7|chr1 (133628449-133628322) |
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111-238, gnl|monDom2|scaffold_13 (3938005-3938091) |
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111-238, gnl|oryCun1|scaffold_83149 (13387-13303) |
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111-238, gnl|panTro1|chr1 (183334641-183334727) |
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111-238, gnl|rheMac2|chr1 (166722540-166722454) |
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111-238, gnl|rn3|chr13 (46696894-46696808) |
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111-238, gnl|tetNig1|chrUn_random (12125579-12125493) |
|
111-238, gnl|xenTro1|scaffold_19 (759452-759366) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
111-238, gnl|bosTau2|chr16 (2855272-2855399) |
|
111-238, gnl|canFam2|chr38 (3381001-3381087) |
|
111-238, gnl|danRer3|chr11 (21176348-21176434) |
|
111-238, gnl|dasNov1|scaffold_137946 (3835-3921) |
|
111-238, gnl|echTel1|scaffold_211572 (3873-3787) |
|
111-238, gnl|fr1|chrUn (75935025-75934939) |
|
111-238, gnl|galGal2|chr26 (3690017-3690103) |
|
111-238, gnl|hg17|chr1 (200400986-200401072) |
|
111-238, gnl|Hg17|chr1 (200400990-200401117) |
|
111-238, gnl|loxAfr1|scaffold_3228 (66953-66867) |
|
111-238, gnl|mm7|chr1 (133628455-133628369) |
|
111-238, gnl|Mm7|chr1 (133628449-133628322) |
|
111-238, gnl|monDom2|scaffold_13 (3938005-3938091) |
|
111-238, gnl|oryCun1|scaffold_83149 (13387-13303) |
|
111-238, gnl|panTro1|chr1 (183334641-183334727) |
|
111-238, gnl|rheMac2|chr1 (166722540-166722454) |
|
111-238, gnl|rn3|chr13 (46696894-46696808) |
|
111-238, gnl|tetNig1|chrUn_random (12125579-12125493) |
|
111-238, gnl|xenTro1|scaffold_19 (759452-759366) |
