Non-Coding RNA Search

mA2-MI-P-A2-aaq-g-12-1-UM.s1

Sequence:


               
               CGAACCCCTTCGCTAGTTTTTATCGGAGCGGCCGCTCGCGTTTTAGAACTTGTCCAAAAG
GGTGAATATTTTGAACTTTACATCATCATTTGATGTCAAGTTCAAAAGAGTGAATATTTT
TCCATGTTCAGTTAAAAGTGCACAGTTTTTTACAGGTTGACACATTGATTGACCTGATTT
TTGCAGAATTAATTAGCTATTCAGATAGTGTAGCTTTAGTTTGCTGCACAAGATATTGGC
AGCCTGGGAGTTCATAGGTTGACTTGGGACCCAGCAGTTTTGAAACATGTTTTTGGGGTT
TAAGAAATTTATTTTTCAGGTGCAACCCCCATTTAAATAAATTTTTTTTCCCCTTGTACA
CTTGACAGTTGAAAAGGCCCTTATTTGGGGGTAATAATGGGTCAAAATTTACAAAATAAA
ATACTGTTTTGGTTTGGGGAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAACCCCTTCGCTAGTTTTTATCGGAGCGGCCGCTCGCGTTTTAGAACTTGTCCAAAAG
GGTGAATATTTTGAACTTTACATCATCATTTGATGTCAAGTTCAAAAGAGTGAATATTTT
TCCATGTTCAGTTAAAAGTGCACAGTTTTTTACAGGTTGACACATTGATTGACCTGATTT
TTGCAGAATTAATTAGCTATTCAGATAGTGTAGCTTTAGTTTGCTGCACAAGATATTGGC
AGCCTGGGAGTTCATAGGTTGACTTGGGACCCAGCAGTTTTGAAACATGTTTTTGGGGTT
TAAGAAATTTATTTTTCAGGTGCAACCCCCATTTAAATAAATTTTTTTTCCCCTTGTACA
CTTGACAGTTGAAAAGGCCCTTATTTGGGGGTAATAATGGGTCAAAATTTACAAAATAAA
ATACTGTTTTGGTTTGGGGAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               130-327, + strand, RNAz p=0.94969

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               130-327, + strand, RNAz p=0.94969

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_181892, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_181892, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               91-438, gnl|bosTau2|chr22 (42644711-42645059)
               

               
               91-438, gnl|Hg17|chr4 (104074878-104074530)
               

               
               91-438, gnl|Mm7|chr3 (135260511-135260868)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               91-438, gnl|bosTau2|chr22 (42644711-42645059)
               

               
               91-438, gnl|Hg17|chr4 (104074878-104074530)
               

               
               91-438, gnl|Mm7|chr3 (135260511-135260868)

	91-438, gnl\|bosTau2\|chr22 (42644711-42645059)
	91-438, gnl\|Hg17\|chr4 (104074878-104074530)
	91-438, gnl\|Mm7\|chr3 (135260511-135260868)