Non-Coding RNA Search

mA2-MI-P-A2-acp-f-03-1-UM.s1

Sequence:


               
               CCTGGAAGCTGGGCGCACCCTGTCTGCCTCCAACATCCAGAAGGAGTCCACCCTGCACTT
GGTCCTGCGCTTGAGGGGAGGTTTCTACGTTCTCCCTCTTCAAGCTTTCAACAAATTTCA
TTGCATTTTCTTTCAATAAAGTTGTTGCCTCCCAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGAAGCTGGGCGCACCCTGTCTGCCTCCAACATCCAGAAGGAGTCCACCCTGCACTT
GGTCCTGCGCTTGAGGGGAGGTTTCTACGTTCTCCCTCTTCAAGCTTTCAACAAATTTCA
TTGCATTTTCTTTCAATAAAGTTGTTGCCTCCCAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               40-156, - strand, RNAz p=0.85735

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-156, - strand, RNAz p=0.85735

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

Help | Less info


               
               2-156, gnl|bosTau2|chr17 (26090533-26090378)
               

               
               2-156, gnl|canFam2|chr26 (8019345-8019445)
               

               
               2-156, gnl|danRer3|chr5 (46449069-46449172)
               

               
               2-156, gnl|dasNov1|scaffold_69833 (6694-6591)
               

               
               2-156, gnl|echTel1|scaffold_166827 (3664-3563)
               

               
               2-156, gnl|Hg17|chr12 (123921226-123921072)
               

               
               2-156, gnl|hg17|chrX (9212652-9212775)
               

               
               2-156, gnl|loxAfr1|scaffold_855 (97021-96924)
               

               
               2-156, gnl|mm7|chr5 (124625884-124625786)
               

               
               2-156, gnl|oryCun1|scaffold_160127 (3318-3218)
               

               
               2-156, gnl|panTro1|chrX (9515806-9515932)
               

               
               2-156, gnl|rheMac2|chrX (7058866-7058740)
               

               
               2-156, gnl|rn3|chr12 (32200785-32200883)
               

               
               2-156, gnl|tetNig1|chr7 (2144319-2144422)

Aligned organism(s): 14 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-156, gnl|bosTau2|chr17 (26090533-26090378)
               

               
               2-156, gnl|canFam2|chr26 (8019345-8019445)
               

               
               2-156, gnl|danRer3|chr5 (46449069-46449172)
               

               
               2-156, gnl|dasNov1|scaffold_69833 (6694-6591)
               

               
               2-156, gnl|echTel1|scaffold_166827 (3664-3563)
               

               
               2-156, gnl|Hg17|chr12 (123921226-123921072)
               

               
               2-156, gnl|hg17|chrX (9212652-9212775)
               

               
               2-156, gnl|loxAfr1|scaffold_855 (97021-96924)
               

               
               2-156, gnl|mm7|chr5 (124625884-124625786)
               

               
               2-156, gnl|oryCun1|scaffold_160127 (3318-3218)
               

               
               2-156, gnl|panTro1|chrX (9515806-9515932)
               

               
               2-156, gnl|rheMac2|chrX (7058866-7058740)
               

               
               2-156, gnl|rn3|chr12 (32200785-32200883)
               

               
               2-156, gnl|tetNig1|chr7 (2144319-2144422)

	2-156, gnl\|bosTau2\|chr17 (26090533-26090378)
	2-156, gnl\|canFam2\|chr26 (8019345-8019445)
	2-156, gnl\|danRer3\|chr5 (46449069-46449172)
	2-156, gnl\|dasNov1\|scaffold_69833 (6694-6591)
	2-156, gnl\|echTel1\|scaffold_166827 (3664-3563)
	2-156, gnl\|Hg17\|chr12 (123921226-123921072)
	2-156, gnl\|hg17\|chrX (9212652-9212775)
	2-156, gnl\|loxAfr1\|scaffold_855 (97021-96924)
	2-156, gnl\|mm7\|chr5 (124625884-124625786)
	2-156, gnl\|oryCun1\|scaffold_160127 (3318-3218)
	2-156, gnl\|panTro1\|chrX (9515806-9515932)
	2-156, gnl\|rheMac2\|chrX (7058866-7058740)
	2-156, gnl\|rn3\|chr12 (32200785-32200883)
	2-156, gnl\|tetNig1\|chr7 (2144319-2144422)