mA2-MI-P-A2-aez-d-04-1-UM.s1
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GAAGCATCTGCGTCTCAGTGTCGAATTTGAAGCAAATGATTTACAGGGAGGCTCTGTAGG
CAGTCCCAACTTAAATACAAACGCCAAAGACAGTGATGAGAAGATTGTGCAGAATGCTAT
CATCCAAACAATAGGATTTTTTGGAAGTAACCTGCCAGATTATCAGAGGTCGGAAATCAT
GATGTTCATTATGGGGAAAGTACCCGTTTTTGGGACATCCACCCATACTTTGGATATCAG
TCAACTAGGGGATCTTGGAACCAGGCGGATTCAGATAATGTTGCTGAGATCTTTACTTAT
GGTAACCTCAGGATACAAAGCAAAGACGATTGTTACTGCACTGCCAGGGTCTTTCCTGGA
TCCTTTGTTATCACCATCCCTCATGGAAGACTATGAACTGAGACAGTTAGTCTTGGAAGT
AATGCATAATCTTATGGATCGCCATGACAACAGGGCAAAGCTTCGAGGGATCAGAATAAT
ACCAGATGTGGCTGACCTAAAGATAAAAAAAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GAAGCATCTGCGTCTCAGTGTCGAATTTGAAGCAAATGATTTACAGGGAGGCTCTGTAGG
CAGTCCCAACTTAAATACAAACGCCAAAGACAGTGATGAGAAGATTGTGCAGAATGCTAT
CATCCAAACAATAGGATTTTTTGGAAGTAACCTGCCAGATTATCAGAGGTCGGAAATCAT
GATGTTCATTATGGGGAAAGTACCCGTTTTTGGGACATCCACCCATACTTTGGATATCAG
TCAACTAGGGGATCTTGGAACCAGGCGGATTCAGATAATGTTGCTGAGATCTTTACTTAT
GGTAACCTCAGGATACAAAGCAAAGACGATTGTTACTGCACTGCCAGGGTCTTTCCTGGA
TCCTTTGTTATCACCATCCCTCATGGAAGACTATGAACTGAGACAGTTAGTCTTGGAAGT
AATGCATAATCTTATGGATCGCCATGACAACAGGGCAAAGCTTCGAGGGATCAGAATAAT
ACCAGATGTGGCTGACCTAAAGATAAAAAAAAAAAAAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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133-256, gnl|bosTau2|chr14 (4938125-4938002) |
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133-256, gnl|canFam2|chr13 (31674160-31674240) |
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133-256, gnl|danRer3|chr2 (37975123-37975203) |
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133-256, gnl|dasNov1|scaffold_275343 (875-795) |
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133-256, gnl|echTel1|scaffold_260150 (1357-1277) |
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133-256, gnl|fr1|chrUn (53165027-53164947) |
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133-256, gnl|galGal2|chr2 (142458593-142458513) |
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133-256, gnl|hg17|chr8 (133057455-133057535) |
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133-256, gnl|Hg17|chr8 (133057454-133057577) |
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133-256, gnl|mm7|chr15 (65933132-65933212) |
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133-256, gnl|Mm7|chr15 (65933131-65933254) |
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133-256, gnl|monDom2|scaffold_3 (18868942-18868862) |
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133-256, gnl|oryCun1|scaffold_207624 (75077-74997) |
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133-256, gnl|panTro1|chr7 (135785610-135785690) |
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133-256, gnl|rheMac2|chr8 (134547832-134547912) |
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133-256, gnl|rn3|chr7 (103239176-103239256) |
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133-256, gnl|tetNig1|chrUn_random (125225594-125225514) |
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133-256, gnl|xenTro1|scaffold_854 (42918-42998) |
| |
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301-474, gnl|bosTau2|chr14 (4935887-4935714) |
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301-474, gnl|Hg17|chr8 (133060275-133060448) |
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301-474, gnl|Mm7|chr15 (65936330-65936503) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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133-256, gnl|bosTau2|chr14 (4938125-4938002) |
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133-256, gnl|canFam2|chr13 (31674160-31674240) |
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133-256, gnl|danRer3|chr2 (37975123-37975203) |
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133-256, gnl|dasNov1|scaffold_275343 (875-795) |
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133-256, gnl|echTel1|scaffold_260150 (1357-1277) |
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133-256, gnl|fr1|chrUn (53165027-53164947) |
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133-256, gnl|galGal2|chr2 (142458593-142458513) |
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133-256, gnl|hg17|chr8 (133057455-133057535) |
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133-256, gnl|Hg17|chr8 (133057454-133057577) |
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133-256, gnl|mm7|chr15 (65933132-65933212) |
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133-256, gnl|Mm7|chr15 (65933131-65933254) |
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133-256, gnl|monDom2|scaffold_3 (18868942-18868862) |
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133-256, gnl|oryCun1|scaffold_207624 (75077-74997) |
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133-256, gnl|panTro1|chr7 (135785610-135785690) |
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133-256, gnl|rheMac2|chr8 (134547832-134547912) |
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133-256, gnl|rn3|chr7 (103239176-103239256) |
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133-256, gnl|tetNig1|chrUn_random (125225594-125225514) |
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133-256, gnl|xenTro1|scaffold_854 (42918-42998) |
| |
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301-474, gnl|bosTau2|chr14 (4935887-4935714) |
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301-474, gnl|Hg17|chr8 (133060275-133060448) |
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301-474, gnl|Mm7|chr15 (65936330-65936503) |
