Non-Coding RNA Search

mA2-MI-P-A2-afc-d-07-1-UM.s1

Sequence:


               
               ACAAAGAGCAAGCCCAACAGATCCATCATGAAATCCTCCTGAACTTGATACTGAGAGTGC
TGCGCTCCTGGAATGACCCGCTGTATCACCTGGTCACGGAAGTGAGGGGTATGCAGGAAG
CCCCAGATGCTATCCTCTCGAGAGCCATAGAGATCGAGGAACAAAACAAACGGCTTCTAG
AAGGCATGGAGAAGATAGTCGGCCAGGTCCATCCTGGAATCAAGGAGAATGAGGTCTACT
CTGTGTGGTCCGGACTTCCCTCCCTGCAGATGGCTGATGAAGACACTCGCCTTTTTGCTT
TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAATTATCTCAAGC
TTCTCAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACGTCCATCCCGTCTGTT
TCTTAACTGTTTCTTAACGCTCCATCCNCATAGAAAGATTCTTTTAGTTTTATAGCTTTT
TAATGCATGCTTGGGTGTAACGCATCTCCTCTTAAAAAAATAAAGACTCCGTAGAGATGT
CAAAAATCTTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAAAGAGCAAGCCCAACAGATCCATCATGAAATCCTCCTGAACTTGATACTGAGAGTGC
TGCGCTCCTGGAATGACCCGCTGTATCACCTGGTCACGGAAGTGAGGGGTATGCAGGAAG
CCCCAGATGCTATCCTCTCGAGAGCCATAGAGATCGAGGAACAAAACAAACGGCTTCTAG
AAGGCATGGAGAAGATAGTCGGCCAGGTCCATCCTGGAATCAAGGAGAATGAGGTCTACT
CTGTGTGGTCCGGACTTCCCTCCCTGCAGATGGCTGATGAAGACACTCGCCTTTTTGCTT
TTTATAACCTGCTCCACTGCCTACGCAGGGATTCACATAAGATTGACAATTATCTCAAGC
TTCTCAAGTGCCGAATCATCTACGACAGCAACTGCTAAGCCCACGTCCATCCCGTCTGTT
TCTTAACTGTTTCTTAACGCTCCATCCNCATAGAAAGATTCTTTTAGTTTTATAGCTTTT
TAATGCATGCTTGGGTGTAACGCATCTCCTCTTAAAAAAATAAAGACTCCGTAGAGATGT
CAAAAATCTTAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|1183|emb|CAA44910.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|1183|emb|CAA44910.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               28-197, gnl|bosTau2|chr23 (28184410-28184241)
               

               
               28-197, gnl|Hg17|chr6 (22398560-22398392)
               

               
               28-197, gnl|Mm7|chr13 (26429815-26429983)
               


               
               205-554, gnl|bosTau2|chr12 (36296372-36296025)
               

               
               205-554, gnl|Hg17|chr6 (22395803-22395453)
               

               
               205-554, gnl|Mm7|chr13 (26430404-26430752)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-197, gnl|bosTau2|chr23 (28184410-28184241)
               

               
               28-197, gnl|Hg17|chr6 (22398560-22398392)
               

               
               28-197, gnl|Mm7|chr13 (26429815-26429983)
               


               
               205-554, gnl|bosTau2|chr12 (36296372-36296025)
               

               
               205-554, gnl|Hg17|chr6 (22395803-22395453)
               

               
               205-554, gnl|Mm7|chr13 (26430404-26430752)

	28-197, gnl\|bosTau2\|chr23 (28184410-28184241)
	28-197, gnl\|Hg17\|chr6 (22398560-22398392)
	28-197, gnl\|Mm7\|chr13 (26429815-26429983)

	205-554, gnl\|bosTau2\|chr12 (36296372-36296025)
	205-554, gnl\|Hg17\|chr6 (22395803-22395453)
	205-554, gnl\|Mm7\|chr13 (26430404-26430752)