mA2-MI-P-A2-afd-c-12-1-UM.s1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCCATCAGGTATTGCTCCAGAGACACCGGATGCCTGATGTACACATTGGTCTGGATGT CCTTGGCAGGCAGCCGCTCCAGCTCTGTGTGAACTCAGCCACCCGGTTCTGGGACAGCAG GAAGAGGAGGTTGAGCCCCAAGAGCTGGTGCATATAGGCTGACTCCGGGAGCTGCTCCTT GTAATCGAAGTAGTAGCATTTGAGCTGGGCCATGTACCGCTCGAAGGAGGGGATGTCCTT GCGTAAGATACTCCACTGGGCCCCGATCTCCAGTATGTCACGGGCCAGAATGAGCTGCTG TTTGGTCAGTTTGGTCCCTGTGGTTGGCAGGAAGTTGAGCTCCAACAGAACCAGCTTGAG ACGGCCCAGTTCTTCACCGCATTTGCTAAGATTGGGCTTTTACGGTTCCACTCGCCCTTG AGTTGTTCGTACATACCGGCTGCGGCCTGCAGGACTGCGCCCGAGGCCGCTGCAGGCCCC GAGCTCGAGCCGCCAGCCACCCCGTTCACCGTCGCGGCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCCATCAGGTATTGCTCCAGAGACACCGGATGCCTGATGTACACATTGGTCTGGATGT CCTTGGCAGGCAGCCGCTCCAGCTCTGTGTGAACTCAGCCACCCGGTTCTGGGACAGCAG GAAGAGGAGGTTGAGCCCCAAGAGCTGGTGCATATAGGCTGACTCCGGGAGCTGCTCCTT GTAATCGAAGTAGTAGCATTTGAGCTGGGCCATGTACCGCTCGAAGGAGGGGATGTCCTT GCGTAAGATACTCCACTGGGCCCCGATCTCCAGTATGTCACGGGCCAGAATGAGCTGCTG TTTGGTCAGTTTGGTCCCTGTGGTTGGCAGGAAGTTGAGCTCCAACAGAACCAGCTTGAG ACGGCCCAGTTCTTCACCGCATTTGCTAAGATTGGGCTTTTACGGTTCCACTCGCCCTTG AGTTGTTCGTACATACCGGCTGCGGCCTGCAGGACTGCGCCCGAGGCCGCTGCAGGCCCC GAGCTCGAGCCGCCAGCCACCCCGTTCACCGTCGCGGCCGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 53-171, + strand, RNAz p=0.552516 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 53-171, + strand, RNAz p=0.552516 |
| Aligned organism(s): 48 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
| 14-178, gnl|bosTau2|chr18 (41118072-41118237) | |
| 14-178, gnl|canFam2|chr1 (117533014-117533177) | |
| 14-178, gnl|canFam2|chr1 (117533173-117533015) | |
| 14-178, gnl|canFam2|chr1 (117533201-117533012) | |
| 14-178, gnl|danRer3|chr18 (47487082-47486922) | |
| 14-178, gnl|danRer3|chr18 (47316701-47316939) | |
| 14-178, gnl|danRer3|chr18 (47316669-47316865) | |
| 14-178, gnl|dasNov1|scaffold_29208 (12526-12690) | |
| 14-178, gnl|dasNov1|scaffold_29208 (12679-12529) | |
| 14-178, gnl|dasNov1|scaffold_29208 (12704-12524) | |
| 14-178, gnl|echTel1|scaffold_218583 (899-1061) | |
| 14-178, gnl|echTel1|scaffold_218583 (1057-898) | |
| 14-178, gnl|echTel1|scaffold_264399 (9895-10084) | |
| 14-178, gnl|fr1|chrUn (65951374-65951214) | |
| 14-178, gnl|fr1|chrUn (65951217-65951373) | |
| 14-178, gnl|fr1|chrUn (65951192-65951379) | |
| 14-178, gnl|hg17|chr1 (151200265-151200428) | |
| 14-178, gnl|hg17|chr18 (846526-846689) | |
| 14-178, gnl|hg17|chr19 (43561698-43561892) | |
| 14-178, gnl|Hg17|chr19 (43561885-43561720) | |
| 14-178, gnl|loxAfr1|scaffold_14252 (7250-7413) | |
| 14-178, gnl|loxAfr1|scaffold_14252 (7409-7250) | |
| 14-178, gnl|loxAfr1|scaffold_14252 (7437-7245) | |
| 14-178, gnl|mm7|chr7 (26116303-26116466) | |
| 14-178, gnl|mm7|chr7 (26116465-26116304) | |
| 14-178, gnl|mm7|chr7 (26116495-26116301) | |
| 14-178, gnl|Mm7|chr7 (26116301-26116466) | |
| 14-178, gnl|monDom2|scaffold_139 (488230-488067) | |
| 14-178, gnl|monDom2|scaffold_139 (488043-488231) | |
| 14-178, gnl|monDom2|scaffold_39 (18088071-18088231) | |
| 14-178, gnl|panTro1|chr1 (133187305-133187468) | |
| 14-178, gnl|panTro1|chr17 (11954057-11953894) | |
| 14-178, gnl|panTro1|chr17 (11954054-11953896) | |
| 14-178, gnl|rheMac2|chr1 (132954311-132954474) | |
| 14-178, gnl|rheMac2|chr1 (132954475-132954310) | |
| 14-178, gnl|rheMac2|chr18 (13247777-13247614) | |
| 14-178, gnl|rn3|chr1 (84389962-84389769) | |
| 14-178, gnl|rn3|chr3 (42597356-42597519) | |
| 14-178, gnl|rn3|chr3 (42597515-42597355) | |
| 14-178, gnl|tetNig1|chr16 (5122620-5122460) | |
| 14-178, gnl|tetNig1|chr16 (5122463-5122619) | |
| 14-178, gnl|tetNig1|chr16 (5122454-5122625) | |
| 14-178, gnl|xenTro1|scaffold_572 (450793-450630) | |
| 14-178, gnl|xenTro1|scaffold_572 (450633-450792) | |
| 14-178, gnl|xenTro1|scaffold_572 (450627-450794) | |
| 355-521, gnl|bosTau2|chr18 (41120952-41121119) | |
| 355-521, gnl|Hg17|chr19 (43557441-43557274) | |
| 355-521, gnl|Mm7|chr7 (26119512-26119685) |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 14-178, gnl|bosTau2|chr18 (41118072-41118237) | |
| 14-178, gnl|canFam2|chr1 (117533014-117533177) | |
| 14-178, gnl|canFam2|chr1 (117533173-117533015) | |
| 14-178, gnl|canFam2|chr1 (117533201-117533012) | |
| 14-178, gnl|danRer3|chr18 (47487082-47486922) | |
| 14-178, gnl|danRer3|chr18 (47316701-47316939) | |
| 14-178, gnl|danRer3|chr18 (47316669-47316865) | |
| 14-178, gnl|dasNov1|scaffold_29208 (12526-12690) | |
| 14-178, gnl|dasNov1|scaffold_29208 (12679-12529) | |
| 14-178, gnl|dasNov1|scaffold_29208 (12704-12524) | |
| 14-178, gnl|echTel1|scaffold_218583 (899-1061) | |
| 14-178, gnl|echTel1|scaffold_218583 (1057-898) | |
| 14-178, gnl|echTel1|scaffold_264399 (9895-10084) | |
| 14-178, gnl|fr1|chrUn (65951374-65951214) | |
| 14-178, gnl|fr1|chrUn (65951217-65951373) | |
| 14-178, gnl|fr1|chrUn (65951192-65951379) | |
| 14-178, gnl|hg17|chr1 (151200265-151200428) | |
| 14-178, gnl|hg17|chr18 (846526-846689) | |
| 14-178, gnl|hg17|chr19 (43561698-43561892) | |
| 14-178, gnl|Hg17|chr19 (43561885-43561720) | |
| 14-178, gnl|loxAfr1|scaffold_14252 (7250-7413) | |
| 14-178, gnl|loxAfr1|scaffold_14252 (7409-7250) | |
| 14-178, gnl|loxAfr1|scaffold_14252 (7437-7245) | |
| 14-178, gnl|mm7|chr7 (26116303-26116466) | |
| 14-178, gnl|mm7|chr7 (26116465-26116304) | |
| 14-178, gnl|mm7|chr7 (26116495-26116301) | |
| 14-178, gnl|Mm7|chr7 (26116301-26116466) | |
| 14-178, gnl|monDom2|scaffold_139 (488230-488067) | |
| 14-178, gnl|monDom2|scaffold_139 (488043-488231) | |
| 14-178, gnl|monDom2|scaffold_39 (18088071-18088231) | |
| 14-178, gnl|panTro1|chr1 (133187305-133187468) | |
| 14-178, gnl|panTro1|chr17 (11954057-11953894) | |
| 14-178, gnl|panTro1|chr17 (11954054-11953896) | |
| 14-178, gnl|rheMac2|chr1 (132954311-132954474) | |
| 14-178, gnl|rheMac2|chr1 (132954475-132954310) | |
| 14-178, gnl|rheMac2|chr18 (13247777-13247614) | |
| 14-178, gnl|rn3|chr1 (84389962-84389769) | |
| 14-178, gnl|rn3|chr3 (42597356-42597519) | |
| 14-178, gnl|rn3|chr3 (42597515-42597355) | |
| 14-178, gnl|tetNig1|chr16 (5122620-5122460) | |
| 14-178, gnl|tetNig1|chr16 (5122463-5122619) | |
| 14-178, gnl|tetNig1|chr16 (5122454-5122625) | |
| 14-178, gnl|xenTro1|scaffold_572 (450793-450630) | |
| 14-178, gnl|xenTro1|scaffold_572 (450633-450792) | |
| 14-178, gnl|xenTro1|scaffold_572 (450627-450794) | |
| 355-521, gnl|bosTau2|chr18 (41120952-41121119) | |
| 355-521, gnl|Hg17|chr19 (43557441-43557274) | |
| 355-521, gnl|Mm7|chr7 (26119512-26119685) |