Non-Coding RNA Search

mAY1-MI-P-AY1-npx-a-04-0-UI.s1

Sequence:


               
               GATAGGAGTCCATAGGGAGTCCTAACATTTTGTAAAAATAATCCACAATTTTTTTTTCCT
CTCTTAGCTAATAATTCCATGTGTTCTCTTATCTACTTAATGTTTTCTTAATAAGATTTT
TCTTCTGCTCTGTTAATGTGTTATGTAAATTATTTGGGATTATATTCCAGGAAGAATACA
ATTCTGAGGATGTTCATAATTGGTATTAATTGCATATTGTCAAGTCTTAATTTTAAGTTG
GACTTAGGGAAGAAAGGGATTTGCATAACTAATTCAATATTACTCTGGGATCTAATATAG
TCATTCTAGTATAGGGGAGTATATCTTTAATTTTCGTATCAGTGAATCATAAATCTAGAA
TTGACCCACCATTAAGTTTTCAATAGATTCCTTGCTAGTGCTCTAAATATGGATAACTGG
TTTTGTTAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATAGGAGTCCATAGGGAGTCCTAACATTTTGTAAAAATAATCCACAATTTTTTTTTCCT
CTCTTAGCTAATAATTCCATGTGTTCTCTTATCTACTTAATGTTTTCTTAATAAGATTTT
TCTTCTGCTCTGTTAATGTGTTATGTAAATTATTTGGGATTATATTCCAGGAAGAATACA
ATTCTGAGGATGTTCATAATTGGTATTAATTGCATATTGTCAAGTCTTAATTTTAAGTTG
GACTTAGGGAAGAAAGGGATTTGCATAACTAATTCAATATTACTCTGGGATCTAATATAG
TCATTCTAGTATAGGGGAGTATATCTTTAATTTTCGTATCAGTGAATCATAAATCTAGAA
TTGACCCACCATTAAGTTTTCAATAGATTCCTTGCTAGTGCTCTAAATATGGATAACTGG
TTTTGTTAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               77-270, + strand, RNAz p=0.984011

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               77-270, + strand, RNAz p=0.984011

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               3-328, gnl|bosTau2|chr5 (22933464-22933795)
               

               
               3-328, gnl|Hg17|chr12 (48895068-48894454)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-328, gnl|bosTau2|chr5 (22933464-22933795)
               

               
               3-328, gnl|Hg17|chr12 (48895068-48894454)

	3-328, gnl\|bosTau2\|chr5 (22933464-22933795)
	3-328, gnl\|Hg17\|chr12 (48895068-48894454)