Non-Coding RNA Search

mAY1-MI-P-AY1-npz-f-06-0-UI.s1

Sequence:


               
               GCAGTATCTCTACCTACAGGAGAACAGCGTGCTCCACCTACAGGATGACCTGTTCGCGGA
CCTGGCCAACATGAGCCACCTCTTCCTCCACGGGAACCGCCTGCGGCTGCTCACGGAGCA
CGTGTTCCGCGGCCTGGGCAGCCTAGACCGGCTGCTGCTGCACGGGAACCGGCTGCAGGG
CGTGCACCGCGCGGCCTTCCGCGGCCTCAGCCGCCTCACCATCCTCTACCTGTTCAACAA
CAGCCTGGCCTCGCTGCCCGGCGAGGCGCTCGCCGACCTGCCGGCGCTCGAGTTCCTACG
GCTCAACGCCAACCCCTGGGCGTGCGACTGCCGCGCGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGTATCTCTACCTACAGGAGAACAGCGTGCTCCACCTACAGGATGACCTGTTCGCGGA
CCTGGCCAACATGAGCCACCTCTTCCTCCACGGGAACCGCCTGCGGCTGCTCACGGAGCA
CGTGTTCCGCGGCCTGGGCAGCCTAGACCGGCTGCTGCTGCACGGGAACCGGCTGCAGGG
CGTGCACCGCGCGGCCTTCCGCGGCCTCAGCCGCCTCACCATCCTCTACCTGTTCAACAA
CAGCCTGGCCTCGCTGCCCGGCGAGGCGCTCGCCGACCTGCCGGCGCTCGAGTTCCTACG
GCTCAACGCCAACCCCTGGGCGTGCGACTGCCGCGCGCGGCCGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61862410|ref|XP_607470.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61862410|ref|XP_607470.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               187-306, - strand, RNAz p=0.772315

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               187-306, - strand, RNAz p=0.772315

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               28-344, gnl|bosTau2|chr15 (50692613-50692299)
               

               
               28-344, gnl|Hg17|chr11 (57000197-57000511)
               

               
               28-344, gnl|Mm7|chr2 (84716418-84716111)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-344, gnl|bosTau2|chr15 (50692613-50692299)
               

               
               28-344, gnl|Hg17|chr11 (57000197-57000511)
               

               
               28-344, gnl|Mm7|chr2 (84716418-84716111)

	28-344, gnl\|bosTau2\|chr15 (50692613-50692299)
	28-344, gnl\|Hg17\|chr11 (57000197-57000511)
	28-344, gnl\|Mm7\|chr2 (84716418-84716111)