Non-Coding RNA Search

mAY1-MI-P-AY1-nqq-d-09-0-UI.s1

Sequence:


               
               CTCATGTTTGCCCTTGTTTTTAACTTCTGCTGATGTGAGTTATGGTGTGTTTCTATGTGA
GCTGTTTTTTATTTAAATGTGTAACTGTTTTTCCGTTACTGTGAAACTAAGGTGTTGTGC
TTTTAATTTTTTTTTTTTTAAACAAGTGTTACCATTCTTATTTAAGAGAATAAATTCCAA
ACAATCTTCAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCATGTTTGCCCTTGTTTTTAACTTCTGCTGATGTGAGTTATGGTGTGTTTCTATGTGA
GCTGTTTTTTATTTAAATGTGTAACTGTTTTTCCGTTACTGTGAAACTAAGGTGTTGTGC
TTTTAATTTTTTTTTTTTTAAACAAGTGTTACCATTCTTATTTAAGAGAATAAATTCCAA
ACAATCTTCAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               13-113, - strand, RNAz p=0.993307

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               13-113, - strand, RNAz p=0.993307

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

Help | Less info


               
               13-190, gnl|bosTau2|chr5 (66489669-66489480)
               

               
               13-190, gnl|canFam2|chr27 (48501327-48501590)
               

               
               13-190, gnl|dasNov1|scaffold_58159 (4677-4955)
               

               
               13-190, gnl|echTel1|scaffold_316493 (81250-81532)
               

               
               13-190, gnl|galGal2|chr1 (58576558-58576804)
               

               
               13-190, gnl|hg17|chr22 (16717388-16717665)
               

               
               13-190, gnl|Hg17|chr22 (16717656-16717477)
               

               
               13-190, gnl|loxAfr1|scaffold_13911 (49621-49339)
               

               
               13-190, gnl|mm7|chr6 (121022519-121022858)
               

               
               13-190, gnl|Mm7|chr6 (121022850-121022613)
               

               
               13-190, gnl|monDom2|scaffold_31 (27790459-27790763)
               

               
               13-190, gnl|oryCun1|scaffold_198266 (6437-6714)
               

               
               13-190, gnl|panTro1|chr23 (16642394-16642671)
               

               
               13-190, gnl|rheMac2|chr10 (62557408-62557690)
               

               
               13-190, gnl|rn3|chr4 (157660846-157661172)

Aligned organism(s): 15 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-190, gnl|bosTau2|chr5 (66489669-66489480)
               

               
               13-190, gnl|canFam2|chr27 (48501327-48501590)
               

               
               13-190, gnl|dasNov1|scaffold_58159 (4677-4955)
               

               
               13-190, gnl|echTel1|scaffold_316493 (81250-81532)
               

               
               13-190, gnl|galGal2|chr1 (58576558-58576804)
               

               
               13-190, gnl|hg17|chr22 (16717388-16717665)
               

               
               13-190, gnl|Hg17|chr22 (16717656-16717477)
               

               
               13-190, gnl|loxAfr1|scaffold_13911 (49621-49339)
               

               
               13-190, gnl|mm7|chr6 (121022519-121022858)
               

               
               13-190, gnl|Mm7|chr6 (121022850-121022613)
               

               
               13-190, gnl|monDom2|scaffold_31 (27790459-27790763)
               

               
               13-190, gnl|oryCun1|scaffold_198266 (6437-6714)
               

               
               13-190, gnl|panTro1|chr23 (16642394-16642671)
               

               
               13-190, gnl|rheMac2|chr10 (62557408-62557690)
               

               
               13-190, gnl|rn3|chr4 (157660846-157661172)

	13-190, gnl\|bosTau2\|chr5 (66489669-66489480)
	13-190, gnl\|canFam2\|chr27 (48501327-48501590)
	13-190, gnl\|dasNov1\|scaffold_58159 (4677-4955)
	13-190, gnl\|echTel1\|scaffold_316493 (81250-81532)
	13-190, gnl\|galGal2\|chr1 (58576558-58576804)
	13-190, gnl\|hg17\|chr22 (16717388-16717665)
	13-190, gnl\|Hg17\|chr22 (16717656-16717477)
	13-190, gnl\|loxAfr1\|scaffold_13911 (49621-49339)
	13-190, gnl\|mm7\|chr6 (121022519-121022858)
	13-190, gnl\|Mm7\|chr6 (121022850-121022613)
	13-190, gnl\|monDom2\|scaffold_31 (27790459-27790763)
	13-190, gnl\|oryCun1\|scaffold_198266 (6437-6714)
	13-190, gnl\|panTro1\|chr23 (16642394-16642671)
	13-190, gnl\|rheMac2\|chr10 (62557408-62557690)
	13-190, gnl\|rn3\|chr4 (157660846-157661172)