Non-Coding RNA Search

mAY1-MI-P-AY1-nqw-d-02-0-UI.s1

Sequence:


               
               ACGTACTGAAAGGACAGGCCAGCATCAAGTGTGTGCCCGGACACCCCTCACATTGGAGTG
ACCCCCCACCCATCTGCAGGGCTGGTGAGTGCTCTGCCACCCCTGAGTCCCTGCAGGGCC
CACAGGGCTGCTCTGGCATAGATGTCAAATGTTGAGAACCAGAACCCCCTTTACGTTACC
CTTGGTCTCCCCAGTCTCTGCCAGGCCCTTCTGACCTGGTGACACTAAGACGAATTCTGG
GGTGGGCGCTCCTTGGACAAATCCTTCCCATGATCAGCCTGCTCCCTGCCTTAGTGGTTT
GGCTCCTTGGGCTCACCCACTGCCCTTGGCCCTCCCCTCTTGTTCCAGCCTCTCTGGATG
GGTTNTACAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGTACTGAAAGGACAGGCCAGCATCAAGTGTGTGCCCGGACACCCCTCACATTGGAGTG
ACCCCCCACCCATCTGCAGGGCTGGTGAGTGCTCTGCCACCCCTGAGTCCCTGCAGGGCC
CACAGGGCTGCTCTGGCATAGATGTCAAATGTTGAGAACCAGAACCCCCTTTACGTTACC
CTTGGTCTCCCCAGTCTCTGCCAGGCCCTTCTGACCTGGTGACACTAAGACGAATTCTGG
GGTGGGCGCTCCTTGGACAAATCCTTCCCATGATCAGCCTGCTCCCTGCCTTAGTGGTTT
GGCTCCTTGGGCTCACCCACTGCCCTTGGCCCTCCCCTCTTGTTCCAGCCTCTCTGGATG
GGTTNTACAGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               247-355, - strand, RNAz p=0.903601

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               247-355, - strand, RNAz p=0.903601

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-377, gnl|bosTau2|chr19 (13865455-13865067)
               

               
               3-377, gnl|Hg17|chr17 (24308270-24307873)
               

               
               3-377, gnl|Mm7|chr11 (78058435-78058848)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-377, gnl|bosTau2|chr19 (13865455-13865067)
               

               
               3-377, gnl|Hg17|chr17 (24308270-24307873)
               

               
               3-377, gnl|Mm7|chr11 (78058435-78058848)

	3-377, gnl\|bosTau2\|chr19 (13865455-13865067)
	3-377, gnl\|Hg17\|chr17 (24308270-24307873)
	3-377, gnl\|Mm7\|chr11 (78058435-78058848)