Non-Coding RNA Search

mCP0-MI-P-CP0-nwa-d-05-0-UI.s1

Sequence:


               
               GTGCCCGGGGGGACTTTGCAAGTTTTTGGGATTGTGGTGAACCCGATTGACCCGGTTTTT
TTAACGGCCGTGGCTTTGGAAGTCCAAATTTTTCCTTTGGGGCCCAAGCAGGCCAATACC
CCTTTGGTCAAGGCCCCTTTGGGGCAGTTGCTTTTGGCCCCCGTGGTTACCCAGCCCAAG
AATTTGGCGTTGGTACTTTTGGGGGTTGTTGCCTTCCCTCAATTGGGGGAAGTTCCCGGG
GTTTTTCCCCGCCGTTTTGTGGGTTTGGCCGATTTGGGCAGCAACCCCAGCCATTGTTGT
CCCAACAGTTTGCCCAACCTCCAGGGGTTTCCAACTTGTTTGGTTACTTGGGGCAGATTT
CCTTCCAAAACCCCCCTTTCCAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCCCGGGGGGACTTTGCAAGTTTTTGGGATTGTGGTGAACCCGATTGACCCGGTTTTT
TTAACGGCCGTGGCTTTGGAAGTCCAAATTTTTCCTTTGGGGCCCAAGCAGGCCAATACC
CCTTTGGTCAAGGCCCCTTTGGGGCAGTTGCTTTTGGCCCCCGTGGTTACCCAGCCCAAG
AATTTGGCGTTGGTACTTTTGGGGGTTGTTGCCTTCCCTCAATTGGGGGAAGTTCCCGGG
GTTTTTCCCCGCCGTTTTGTGGGTTTGGCCGATTTGGGCAGCAACCCCAGCCATTGTTGT
CCCAACAGTTTGCCCAACCTCCAGGGGTTTCCAACTTGTTTGGTTACTTGGGGCAGATTT
CCTTCCAAAACCCCCCTTTCCAAAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-199, + strand, RNAz p=0.679109

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-199, + strand, RNAz p=0.679109

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-377, gnl|bosTau2|chr5 (68020981-68021357)
               

               
               1-377, gnl|Hg17|chr22 (37206849-37206473)
               

               
               1-377, gnl|Mm7|chr15 (79614553-79614177)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-377, gnl|bosTau2|chr5 (68020981-68021357)
               

               
               1-377, gnl|Hg17|chr22 (37206849-37206473)
               

               
               1-377, gnl|Mm7|chr15 (79614553-79614177)

	1-377, gnl\|bosTau2\|chr5 (68020981-68021357)
	1-377, gnl\|Hg17\|chr22 (37206849-37206473)
	1-377, gnl\|Mm7\|chr15 (79614553-79614177)