mCP1-MI-P-CP1-nwj-b-11-0-UI.s1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTGACTCTGTGTTCTGTAGAGTCACAATGTAGTCATCTTTTAATNTGTGTTCTTCT GGAGGAATAGGTAAGTTTGAATCCACTTTTCCTGATGATTCGGTATTCTTAGGTCCCTCT CTTTCATCCTTGTTCTGGAACTGTACATCTTCCTTTTCTAGTGCACAATTGTCATCTTGA GAATAATATGATGAAGCTGAAGAACTCTCTTTACAACATACATGCCAACTGGGAAGCCAG ACCAGAGAACACAGAGAGAGGCAGGAGACCAGGGCCAAGGCCCGCCGGTACTTCTTCATC TTTTCCTCCTTCTTTCCCCTGCCAGAAGGCGGCACATCCTCCCGGCAGCCGCCACTGCCG AGGCCAAGATGGAGGAGCCGGAGCAGGAGAGCGAGGATGGAACCGAGAGTCCGAAGGGCT GCGGCGCTGGAGGAGCAGCTCCTGAGCAGCTCGCGCGCTAGCCACCCTCTCTCAGTGGCC CACGGGGGCGCCGACGGGGGCGCTTCACAGGAAGACTCCGGGGTCTGCCGCTGCTGCCGC GGCCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTGACTCTGTGTTCTGTAGAGTCACAATGTAGTCATCTTTTAATNTGTGTTCTTCT GGAGGAATAGGTAAGTTTGAATCCACTTTTCCTGATGATTCGGTATTCTTAGGTCCCTCT CTTTCATCCTTGTTCTGGAACTGTACATCTTCCTTTTCTAGTGCACAATTGTCATCTTGA GAATAATATGATGAAGCTGAAGAACTCTCTTTACAACATACATGCCAACTGGGAAGCCAG ACCAGAGAACACAGAGAGAGGCAGGAGACCAGGGCCAAGGCCCGCCGGTACTTCTTCATC TTTTCCTCCTTCTTTCCCCTGCCAGAAGGCGGCACATCCTCCCGGCAGCCGCCACTGCCG AGGCCAAGATGGAGGAGCCGGAGCAGGAGAGCGAGGATGGAACCGAGAGTCCGAAGGGCT GCGGCGCTGGAGGAGCAGCTCCTGAGCAGCTCGCGCGCTAGCCACCCTCTCTCAGTGGCC CACGGGGGCGCCGACGGGGGCGCTTCACAGGAAGACTCCGGGGTCTGCCGCTGCTGCCGC GGCCGC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 239-398, - strand, RNAz p=0.962328 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 239-398, - strand, RNAz p=0.962328 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 290-388, + strand, RNAmicro p=0.99998 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_014283, - |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 128-238, gnl|bosTau2|chr16 (28809169-28809059) | |
| 128-238, gnl|canFam2|chr7 (29400568-29400217) | |
| 128-238, gnl|dasNov1|scaffold_13909 (9697-9384) | |
| 128-238, gnl|echTel1|scaffold_301217 (7146-6836) | |
| 128-238, gnl|hg17|chr1 (169252178-169252524) | |
| 128-238, gnl|Hg17|chr1 (169252424-169252308) | |
| 128-238, gnl|loxAfr1|scaffold_10898 (38753-38442) | |
| 128-238, gnl|mm7|chr1 (161826636-161826336) | |
| 128-238, gnl|Mm7|chr1 (161826417-161826530) | |
| 128-238, gnl|oryCun1|scaffold_206356 (78370-77973) | |
| 128-238, gnl|panTro1|chr1 (151579540-151579889) | |
| 128-238, gnl|rheMac2|chr1 (202246671-202247019) | |
| 128-238, gnl|rn3|chr13 (77577984-77577687) | |
| 239-546, gnl|bosTau2|chr16 (28761600-28761293) | |
| 239-546, gnl|canFam2|chr7 (29429878-29429452) | |
| 239-546, gnl|dasNov1|scaffold_430 (10623-10185) | |
| 239-546, gnl|echTel1|scaffold_266932 (15037-15468) | |
| 239-546, gnl|hg17|chr1 (169233890-169234310) | |
| 239-546, gnl|Hg17|chr1 (169234283-169233992) | |
| 239-546, gnl|loxAfr1|scaffold_2206 (6346-5932) | |
| 239-546, gnl|mm7|chr1 (161839236-161838799) | |
| 239-546, gnl|Mm7|chr1 (161838868-161839126) | |
| 239-546, gnl|monDom2|scaffold_16 (23759663-23760176) | |
| 239-546, gnl|panTro1|chr1 (151560258-151560684) | |
| 239-546, gnl|rheMac2|chr1 (202229127-202229553) | |
| 239-546, gnl|rn3|chr13 (77590342-77589899) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 128-238, gnl|bosTau2|chr16 (28809169-28809059) | |
| 128-238, gnl|canFam2|chr7 (29400568-29400217) | |
| 128-238, gnl|dasNov1|scaffold_13909 (9697-9384) | |
| 128-238, gnl|echTel1|scaffold_301217 (7146-6836) | |
| 128-238, gnl|hg17|chr1 (169252178-169252524) | |
| 128-238, gnl|Hg17|chr1 (169252424-169252308) | |
| 128-238, gnl|loxAfr1|scaffold_10898 (38753-38442) | |
| 128-238, gnl|mm7|chr1 (161826636-161826336) | |
| 128-238, gnl|Mm7|chr1 (161826417-161826530) | |
| 128-238, gnl|oryCun1|scaffold_206356 (78370-77973) | |
| 128-238, gnl|panTro1|chr1 (151579540-151579889) | |
| 128-238, gnl|rheMac2|chr1 (202246671-202247019) | |
| 128-238, gnl|rn3|chr13 (77577984-77577687) | |
| 239-546, gnl|bosTau2|chr16 (28761600-28761293) | |
| 239-546, gnl|canFam2|chr7 (29429878-29429452) | |
| 239-546, gnl|dasNov1|scaffold_430 (10623-10185) | |
| 239-546, gnl|echTel1|scaffold_266932 (15037-15468) | |
| 239-546, gnl|hg17|chr1 (169233890-169234310) | |
| 239-546, gnl|Hg17|chr1 (169234283-169233992) | |
| 239-546, gnl|loxAfr1|scaffold_2206 (6346-5932) | |
| 239-546, gnl|mm7|chr1 (161839236-161838799) | |
| 239-546, gnl|Mm7|chr1 (161838868-161839126) | |
| 239-546, gnl|monDom2|scaffold_16 (23759663-23760176) | |
| 239-546, gnl|panTro1|chr1 (151560258-151560684) | |
| 239-546, gnl|rheMac2|chr1 (202229127-202229553) | |
| 239-546, gnl|rn3|chr13 (77590342-77589899) |