Non-Coding RNA Search

mCP1-MI-P-CP1-nwo-d-03-0-UI.s1

Sequence:


               
               TGCACCTCCCCGGCTGCTGGCGCCGCGGGGAAAACCCGGCTAGGAGGCGGACCGGGAGAA
GAACGGTGGAGAGCAACCCGCCTGGATTTGTTTGCCCGGGACGGGTGCGGCACACGCGGA
TCGCTGAGGGGAGCGCAGCGAGTCACCGCGCCCCCACCTCCTCGTCCCGGCGGCCCAGGC
TCGCGATTTGGAGTGCGGCCCCGGGCGCCGGCGGCGCCCCGCAGGTTCTAGGTGCAGCGG
GGCCCGGGGTGCCCTGTGATGTGGCCCTGAAGGTGGGAGCCCGCACCGGCGGGAACAGGA
GCTGCTGGGCGCCGAGTGGCCTCTGCGCCCAGCGGAGCGCGCCTGCGTGCGTGGCCAGCG
CGCCCCCCGCACTTCCCGCTACTGCCCGGCTTCTCAGCTTAATTTTCCTCGGCGGGATTA
AAGTTGGAAATTGAGCGGAGAATTGAGTTGCCCGGGAACGGAGCCGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCACCTCCCCGGCTGCTGGCGCCGCGGGGAAAACCCGGCTAGGAGGCGGACCGGGAGAA
GAACGGTGGAGAGCAACCCGCCTGGATTTGTTTGCCCGGGACGGGTGCGGCACACGCGGA
TCGCTGAGGGGAGCGCAGCGAGTCACCGCGCCCCCACCTCCTCGTCCCGGCGGCCCAGGC
TCGCGATTTGGAGTGCGGCCCCGGGCGCCGGCGGCGCCCCGCAGGTTCTAGGTGCAGCGG
GGCCCGGGGTGCCCTGTGATGTGGCCCTGAAGGTGGGAGCCCGCACCGGCGGGAACAGGA
GCTGCTGGGCGCCGAGTGGCCTCTGCGCCCAGCGGAGCGCGCCTGCGTGCGTGGCCAGCG
CGCCCCCCGCACTTCCCGCTACTGCCCGGCTTCTCAGCTTAATTTTCCTCGGCGGGATTA
AAGTTGGAAATTGAGCGGAGAATTGAGTTGCCCGGGAACGGAGCCGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               301-412, - strand, RNAz p=0.947093

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               301-412, - strand, RNAz p=0.947093

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-473, gnl|bosTau2|chr13 (35644862-35644404)
               

               
               1-473, gnl|Hg17|chr9 (81533200-81532720)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-473, gnl|bosTau2|chr13 (35644862-35644404)
               

               
               1-473, gnl|Hg17|chr9 (81533200-81532720)

	1-473, gnl\|bosTau2\|chr13 (35644862-35644404)
	1-473, gnl\|Hg17\|chr9 (81533200-81532720)