mCP1-MI-P-CP1-nwv-g-03-0-UI.s1
|
ACTGGCAAATCAACCTCAAAACGTGCAGTACCACCTCCCCTACCTCCTAAGCCAAGGATA
AACAGTTATCCAGAAGACAACCTCCCAGAGGAAGAAAAATCATCAACTGTAAAACGTTGT
CCTGATTCAGAGAACAGAGCTCCCCAGGTTCTCAGAAGACAGAGTAGTCCGAGTTGTGGC
CCAGTAGCCGAGACTTCAGCTATTGGAAATGGTGATGGTATTTCCAAACTGATTAGTGAA
AATACAGAAGGATCAGCACAGGCACCACAGTTACCACGGAAAAAGGACAAGAGAGATTTC
CCTAAACCAGTCATCAATGGCCTTCCACCCACCCCAAAAGTGCTGATGGGAGCATGTTTT
TCCAAAGTTTTTGATGGCTGCCCTTTGAAAATTAATTGTGCAACATCCTGGATACATCCT
GATACAAAAGAAAAAAAACGATTGGACTGCGGCCGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACTGGCAAATCAACCTCAAAACGTGCAGTACCACCTCCCCTACCTCCTAAGCCAAGGATA
AACAGTTATCCAGAAGACAACCTCCCAGAGGAAGAAAAATCATCAACTGTAAAACGTTGT
CCTGATTCAGAGAACAGAGCTCCCCAGGTTCTCAGAAGACAGAGTAGTCCGAGTTGTGGC
CCAGTAGCCGAGACTTCAGCTATTGGAAATGGTGATGGTATTTCCAAACTGATTAGTGAA
AATACAGAAGGATCAGCACAGGCACCACAGTTACCACGGAAAAAGGACAAGAGAGATTTC
CCTAAACCAGTCATCAATGGCCTTCCACCCACCCCAAAAGTGCTGATGGGAGCATGTTTT
TCCAAAGTTTTTGATGGCTGCCCTTTGAAAATTAATTGTGCAACATCCTGGATACATCCT
GATACAAAAGAAAAAAAACGATTGGACTGCGGCCGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
50-206, gnl|bosTau2|chr10 (28846986-28846830) |
|
50-206, gnl|canFam2|chr8 (29883216-29883480) |
|
50-206, gnl|dasNov1|scaffold_20318 (7162-6904) |
|
50-206, gnl|echTel1|scaffold_224242 (10074-9810) |
|
50-206, gnl|galGal2|chr5 (54495591-54495840) |
|
50-206, gnl|hg17|chr14 (49981426-49981690) |
|
50-206, gnl|Hg17|chr14 (49981664-49981508) |
|
50-206, gnl|loxAfr1|scaffold_33140 (7899-7639) |
|
50-206, gnl|mm7|chr12 (67768276-67768539) |
|
50-206, gnl|Mm7|chr12 (67768512-67768353) |
|
50-206, gnl|monDom2|scaffold_8 (88304054-88303802) |
|
50-206, gnl|oryCun1|scaffold_125736 (11824-12077) |
|
50-206, gnl|panTro1|chr15 (49395878-49396142) |
|
50-206, gnl|rheMac2|chr7 (113509486-113509750) |
|
50-206, gnl|rn3|chr6 (91915051-91915301) |
|
50-206, gnl|xenTro1|scaffold_666 (640701-640439) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
50-206, gnl|bosTau2|chr10 (28846986-28846830) |
|
50-206, gnl|canFam2|chr8 (29883216-29883480) |
|
50-206, gnl|dasNov1|scaffold_20318 (7162-6904) |
|
50-206, gnl|echTel1|scaffold_224242 (10074-9810) |
|
50-206, gnl|galGal2|chr5 (54495591-54495840) |
|
50-206, gnl|hg17|chr14 (49981426-49981690) |
|
50-206, gnl|Hg17|chr14 (49981664-49981508) |
|
50-206, gnl|loxAfr1|scaffold_33140 (7899-7639) |
|
50-206, gnl|mm7|chr12 (67768276-67768539) |
|
50-206, gnl|Mm7|chr12 (67768512-67768353) |
|
50-206, gnl|monDom2|scaffold_8 (88304054-88303802) |
|
50-206, gnl|oryCun1|scaffold_125736 (11824-12077) |
|
50-206, gnl|panTro1|chr15 (49395878-49396142) |
|
50-206, gnl|rheMac2|chr7 (113509486-113509750) |
|
50-206, gnl|rn3|chr6 (91915051-91915301) |
|
50-206, gnl|xenTro1|scaffold_666 (640701-640439) |
