Non-Coding RNA Search

mCP1-MI-P-CP1-nza-d-08-0-UI.s1

Sequence:


               
               TGCCAGTCTTTATGTTGTGAAAAAAATAAAAAGGTAACTGAGCTCCAAAGAAAGAGCAGG
TACTTCTGAGCTCAGAAGCATGTTCTCATAGCCTGCTCCCTGGGAGGGCAGAGATGAACA
GCTTTAAGATGCAGAAAACTTGCTCCTTCATTTCTCCCAGCTTTCCATACTCTACACTAT
GCAGAGGCCTAGAGGCTGAGCTGCTTCAGGGCCTTCGGNTACTACATGGGGCAAAGCCCA
GAACCCATGTAGGCCACTCTGCAGCCGGGACAGTGGGCCCTTGTCCAAGGTATGCAGTGG
CATACTGACTCCTCCCTCGCTTTCCCTGTGAGCCAGGGGTTGTAAAAAGAATGTATCAAC
TATGAAAGGATGCTGTGTCTCAGAAAAGTATCTTAAATTGGGTAAATATCCTTGTTCTTT
TTTGAGTATTGCATGTTATAAAAGGGCTTGGACTGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCCAGTCTTTATGTTGTGAAAAAAATAAAAAGGTAACTGAGCTCCAAAGAAAGAGCAGG
TACTTCTGAGCTCAGAAGCATGTTCTCATAGCCTGCTCCCTGGGAGGGCAGAGATGAACA
GCTTTAAGATGCAGAAAACTTGCTCCTTCATTTCTCCCAGCTTTCCATACTCTACACTAT
GCAGAGGCCTAGAGGCTGAGCTGCTTCAGGGCCTTCGGNTACTACATGGGGCAAAGCCCA
GAACCCATGTAGGCCACTCTGCAGCCGGGACAGTGGGCCCTTGTCCAAGGTATGCAGTGG
CATACTGACTCCTCCCTCGCTTTCCCTGTGAGCCAGGGGTTGTAAAAAGAATGTATCAAC
TATGAAAGGATGCTGTGTCTCAGAAAAGTATCTTAAATTGGGTAAATATCCTTGTTCTTT
TTTGAGTATTGCATGTTATAAAAGGGCTTGGACTGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               166-362, + strand, RNAz p=0.979114

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               166-362, + strand, RNAz p=0.979114

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               126-429, gnl|bosTau2|chr24 (14911236-14910933)
               

               
               126-429, gnl|Hg17|chr18 (32622925-32623213)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               126-429, gnl|bosTau2|chr24 (14911236-14910933)
               

               
               126-429, gnl|Hg17|chr18 (32622925-32623213)

	126-429, gnl\|bosTau2\|chr24 (14911236-14910933)
	126-429, gnl\|Hg17\|chr18 (32622925-32623213)